Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 AC132938.5-201ENST00000624980 1813 ntBASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 ACTG1P4-201ENST00000425123 1122 ntBASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 AL358472.4-201ENST00000633140 710 ntBASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM42Q8IWZ5 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 FAM86EP-206ENST00000510506 987 ntBASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 AC009533.2-201ENST00000543664 586 ntBASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 AC011840.4-201ENST00000578471 627 ntBASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 AC013467.2-201ENST00000605472 835 ntBASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM42Q8IWZ5 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM42Q8IWZ5 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms