Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
HIST2H3AQ71DI3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.7□□□□□ -0.06
HIST2H3AQ71DI3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST2H3AQ71DI3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST2H3AQ71DI3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST2H3AQ71DI3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.7□□□□□ -0.06
HIST2H3AQ71DI3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HIST2H3AQ71DI3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST2H3AQ71DI3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST2H3AQ71DI3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST2H3AQ71DI3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.7□□□□□ -0.06
HIST2H3AQ71DI3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HIST2H3AQ71DI3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HIST2H3AQ71DI3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST2H3AQ71DI3 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 PCDHB19P-201ENST00000570871 2371 ntBASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 UBALD1-205ENST00000590891 2641 ntBASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 MRPL20P1-201ENST00000400819 433 ntBASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 AL031284.1-201ENST00000419297 478 ntBASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 CYP2A7P1-201ENST00000595391 815 ntBASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 MIR7706-201ENST00000613747 67 ntBASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 AL512652.2-201ENST00000625156 1716 ntBASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST2H3AQ71DI3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 HCG4-201ENST00000418983 998 ntBASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 AC108073.2-201ENST00000464002 357 ntBASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 AC117500.6-201ENST00000624871 588 ntBASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms