Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.04■□□□□ -0
NHLRC1Q6VVB1 AC129492.6-201ENST00000611383 1305 ntBASIC15.04■□□□□ -0
NHLRC1Q6VVB1 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.04■□□□□ -0
NHLRC1Q6VVB1 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.04■□□□□ -0
NHLRC1Q6VVB1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.04■□□□□ -0
NHLRC1Q6VVB1 PMS2P1-201ENST00000431037 1228 ntBASIC15.04■□□□□ -0
NHLRC1Q6VVB1 AC108073.2-201ENST00000464002 357 ntBASIC15.04■□□□□ -0
NHLRC1Q6VVB1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.04■□□□□ -0
NHLRC1Q6VVB1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.04■□□□□ -0
NHLRC1Q6VVB1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
NHLRC1Q6VVB1 AL662844.1-201ENST00000546340 181 ntBASIC15.04■□□□□ -0
NHLRC1Q6VVB1 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.04■□□□□ -0
NHLRC1Q6VVB1 MIR1199-201ENST00000621445 119 ntBASIC15.04■□□□□ -0
NHLRC1Q6VVB1 AC004790.2-201ENST00000623588 572 ntBASIC15.04■□□□□ -0
NHLRC1Q6VVB1 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.04■□□□□ -0
NHLRC1Q6VVB1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
NHLRC1Q6VVB1 FER1L4-210ENST00000615531 5998 ntBASIC15.04■□□□□ -0
NHLRC1Q6VVB1 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.04■□□□□ -0
NHLRC1Q6VVB1 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.04■□□□□ -0
NHLRC1Q6VVB1 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
NHLRC1Q6VVB1 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.04■□□□□ -0
NHLRC1Q6VVB1 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NHLRC1Q6VVB1 AC092171.3-201ENST00000610122 2651 ntBASIC15.04■□□□□ -0
NHLRC1Q6VVB1 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
NHLRC1Q6VVB1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.04■□□□□ -0
NHLRC1Q6VVB1 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NHLRC1Q6VVB1 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.04■□□□□ -0
NHLRC1Q6VVB1 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.04■□□□□ -0
NHLRC1Q6VVB1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
NHLRC1Q6VVB1 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.04■□□□□ -0
NHLRC1Q6VVB1 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.04■□□□□ -0
NHLRC1Q6VVB1 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.04■□□□□ -0
NHLRC1Q6VVB1 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
NHLRC1Q6VVB1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NHLRC1Q6VVB1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 AC092850.2-201ENST00000623821 2697 ntBASIC15.03■□□□□ -0
NHLRC1Q6VVB1 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.03■□□□□ -0
NHLRC1Q6VVB1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 AC098831.1-202ENST00000438821 336 ntBASIC15.03■□□□□ -0
NHLRC1Q6VVB1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 AP001005.1-201ENST00000571755 1248 ntBASIC15.03■□□□□ -0
NHLRC1Q6VVB1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 AC091167.2-201ENST00000579581 588 ntBASIC15.03■□□□□ -0
NHLRC1Q6VVB1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 AC005593.1-201ENST00000624894 515 ntBASIC15.03■□□□□ -0
NHLRC1Q6VVB1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.03■□□□□ -0
NHLRC1Q6VVB1 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
NHLRC1Q6VVB1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.02■□□□□ -0
NHLRC1Q6VVB1 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.02■□□□□ -0
NHLRC1Q6VVB1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.02■□□□□ -0
NHLRC1Q6VVB1 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NHLRC1Q6VVB1 AC026691.1-201ENST00000602502 2017 ntBASIC15.02■□□□□ -0
NHLRC1Q6VVB1 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NHLRC1Q6VVB1 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NHLRC1Q6VVB1 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.02■□□□□ -0
NHLRC1Q6VVB1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.02■□□□□ -0
NHLRC1Q6VVB1 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
NHLRC1Q6VVB1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.02■□□□□ -0
NHLRC1Q6VVB1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.02■□□□□ -0
NHLRC1Q6VVB1 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
NHLRC1Q6VVB1 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.02■□□□□ -0
NHLRC1Q6VVB1 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
NHLRC1Q6VVB1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NHLRC1Q6VVB1 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.02■□□□□ -0
NHLRC1Q6VVB1 PRSS29P-201ENST00000440800 595 ntBASIC15.02■□□□□ -0
NHLRC1Q6VVB1 FAM185BP-201ENST00000443595 716 ntBASIC15.02■□□□□ -0
NHLRC1Q6VVB1 AC009947.1-201ENST00000444350 727 ntBASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms