Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF549Q6P9A3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF549Q6P9A3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF549Q6P9A3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF549Q6P9A3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF549Q6P9A3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF549Q6P9A3 FAM185BP-201ENST00000443595 716 ntBASIC16.57■□□□□ 0.24
ZNF549Q6P9A3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ZNF549Q6P9A3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
ZNF549Q6P9A3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.57■□□□□ 0.24
ZNF549Q6P9A3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ZNF549Q6P9A3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF549Q6P9A3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ZNF549Q6P9A3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
ZNF549Q6P9A3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF549Q6P9A3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.57■□□□□ 0.24
ZNF549Q6P9A3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
ZNF549Q6P9A3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF549Q6P9A3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF549Q6P9A3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF549Q6P9A3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 AC108751.1-201ENST00000490852 363 ntBASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 AC087641.1-201ENST00000557561 1021 ntBASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ZNF549Q6P9A3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 AL391005.1-201ENST00000623953 2435 ntBASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 AC009947.1-201ENST00000444350 727 ntBASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 AC010654.1-201ENST00000615722 808 ntBASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 AC026691.1-201ENST00000602502 2017 ntBASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF549Q6P9A3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms