Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
VARS2Q5ST30 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.62■□□□□ 0.41
VARS2Q5ST30 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.62■□□□□ 0.41
VARS2Q5ST30 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.62■□□□□ 0.41
VARS2Q5ST30 RN7SL832P-201ENST00000607781 1756 ntBASIC17.62■□□□□ 0.41
VARS2Q5ST30 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VARS2Q5ST30 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VARS2Q5ST30 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
VARS2Q5ST30 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
VARS2Q5ST30 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VARS2Q5ST30 AP002490.2-201ENST00000524791 560 ntBASIC17.62■□□□□ 0.41
VARS2Q5ST30 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.62■□□□□ 0.41
VARS2Q5ST30 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VARS2Q5ST30 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.62■□□□□ 0.41
VARS2Q5ST30 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.62■□□□□ 0.41
VARS2Q5ST30 AJ011932.1-201ENST00000621707 465 ntBASIC17.62■□□□□ 0.41
VARS2Q5ST30 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VARS2Q5ST30 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VARS2Q5ST30 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.62■□□□□ 0.41
VARS2Q5ST30 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.62■□□□□ 0.41
VARS2Q5ST30 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VARS2Q5ST30 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VARS2Q5ST30 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VARS2Q5ST30 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VARS2Q5ST30 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.62■□□□□ 0.41
VARS2Q5ST30 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
VARS2Q5ST30 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.62■□□□□ 0.41
VARS2Q5ST30 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.61■□□□□ 0.41
VARS2Q5ST30 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VARS2Q5ST30 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VARS2Q5ST30 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VARS2Q5ST30 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
VARS2Q5ST30 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VARS2Q5ST30 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VARS2Q5ST30 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.61■□□□□ 0.41
VARS2Q5ST30 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VARS2Q5ST30 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VARS2Q5ST30 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
VARS2Q5ST30 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
VARS2Q5ST30 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.61■□□□□ 0.41
VARS2Q5ST30 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.61■□□□□ 0.41
VARS2Q5ST30 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.61■□□□□ 0.41
VARS2Q5ST30 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VARS2Q5ST30 INGX-202ENST00000489074 768 ntBASIC17.61■□□□□ 0.41
VARS2Q5ST30 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.61■□□□□ 0.41
VARS2Q5ST30 AC069120.2-201ENST00000524091 540 ntBASIC17.61■□□□□ 0.41
VARS2Q5ST30 AL158211.3-201ENST00000607385 239 ntBASIC17.61■□□□□ 0.41
VARS2Q5ST30 AC018529.1-201ENST00000613063 361 ntBASIC17.61■□□□□ 0.41
VARS2Q5ST30 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC17.61■□□□□ 0.41
VARS2Q5ST30 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VARS2Q5ST30 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
VARS2Q5ST30 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
VARS2Q5ST30 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VARS2Q5ST30 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.61■□□□□ 0.41
VARS2Q5ST30 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
VARS2Q5ST30 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
VARS2Q5ST30 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.6■□□□□ 0.41
VARS2Q5ST30 AL645608.8-201ENST00000606034 2086 ntBASIC17.6■□□□□ 0.41
VARS2Q5ST30 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VARS2Q5ST30 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
VARS2Q5ST30 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
VARS2Q5ST30 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.6■□□□□ 0.41
VARS2Q5ST30 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VARS2Q5ST30 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VARS2Q5ST30 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VARS2Q5ST30 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
VARS2Q5ST30 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.6■□□□□ 0.41
VARS2Q5ST30 IGHV3-42-201ENST00000520410 361 ntBASIC17.6■□□□□ 0.41
VARS2Q5ST30 AC006518.1-201ENST00000541449 943 ntBASIC17.6■□□□□ 0.41
VARS2Q5ST30 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.6■□□□□ 0.41
VARS2Q5ST30 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.6■□□□□ 0.41
VARS2Q5ST30 AL390754.1-201ENST00000619088 582 ntBASIC17.6■□□□□ 0.41
VARS2Q5ST30 AL139011.1-202ENST00000642063 584 ntBASIC17.6■□□□□ 0.41
VARS2Q5ST30 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
VARS2Q5ST30 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.6■□□□□ 0.41
VARS2Q5ST30 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.6■□□□□ 0.41
VARS2Q5ST30 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VARS2Q5ST30 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VARS2Q5ST30 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VARS2Q5ST30 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VARS2Q5ST30 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.6■□□□□ 0.41
VARS2Q5ST30 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VARS2Q5ST30 AC106820.2-201ENST00000563775 3264 ntBASIC17.6■□□□□ 0.41
VARS2Q5ST30 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
VARS2Q5ST30 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VARS2Q5ST30 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
VARS2Q5ST30 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VARS2Q5ST30 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
VARS2Q5ST30 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.59■□□□□ 0.41
VARS2Q5ST30 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
VARS2Q5ST30 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.59■□□□□ 0.41
VARS2Q5ST30 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
VARS2Q5ST30 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VARS2Q5ST30 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VARS2Q5ST30 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.59■□□□□ 0.41
VARS2Q5ST30 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.59■□□□□ 0.41
VARS2Q5ST30 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VARS2Q5ST30 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.59■□□□□ 0.41
VARS2Q5ST30 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.59■□□□□ 0.41
VARS2Q5ST30 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms