Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC58Q4VC31 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC58Q4VC31 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC58Q4VC31 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC58Q4VC31 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.01□□□□□ -0.01
CCDC58Q4VC31 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC58Q4VC31 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC58Q4VC31 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC58Q4VC31 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC58Q4VC31 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC58Q4VC31 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC58Q4VC31 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CCDC58Q4VC31 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC58Q4VC31 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC58Q4VC31 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC58Q4VC31 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC58Q4VC31 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC58Q4VC31 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC58Q4VC31 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15□□□□□ -0.01
CCDC58Q4VC31 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC58Q4VC31 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC58Q4VC31 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC58Q4VC31 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CCDC58Q4VC31 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC58Q4VC31 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC58Q4VC31 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC58Q4VC31 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15□□□□□ -0.01
CCDC58Q4VC31 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15□□□□□ -0.01
CCDC58Q4VC31 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15□□□□□ -0.01
CCDC58Q4VC31 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CCDC58Q4VC31 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15□□□□□ -0.01
CCDC58Q4VC31 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC58Q4VC31 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15□□□□□ -0.01
CCDC58Q4VC31 AC124864.1-201ENST00000623408 392 ntBASIC15□□□□□ -0.01
CCDC58Q4VC31 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC58Q4VC31 AC092364.2-201ENST00000596710 2692 ntBASIC15□□□□□ -0.01
CCDC58Q4VC31 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15□□□□□ -0.01
CCDC58Q4VC31 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15□□□□□ -0.01
CCDC58Q4VC31 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC58Q4VC31 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
CCDC58Q4VC31 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15□□□□□ -0.01
CCDC58Q4VC31 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC58Q4VC31 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC58Q4VC31 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC58Q4VC31 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15□□□□□ -0.01
CCDC58Q4VC31 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CCDC58Q4VC31 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 AL365203.3-201ENST00000609742 2057 ntBASIC14.99□□□□□ -0.01
CCDC58Q4VC31 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 TNRC18P2-201ENST00000417666 2714 ntBASIC14.99□□□□□ -0.01
CCDC58Q4VC31 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 AC126755.1-201ENST00000525846 6405 ntBASIC14.99□□□□□ -0.01
CCDC58Q4VC31 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 TERF1P1-201ENST00000311003 1181 ntBASIC14.99□□□□□ -0.01
CCDC58Q4VC31 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 AC246785.2-201ENST00000432512 513 ntBASIC14.99□□□□□ -0.01
CCDC58Q4VC31 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 AC073508.3-201ENST00000619697 1419 ntBASIC14.99□□□□□ -0.01
CCDC58Q4VC31 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC58Q4VC31 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms