Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 AC129492.6-201ENST00000611383 1305 ntBASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 ADH5P3-201ENST00000433842 1137 ntBASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 AC109322.1-201ENST00000524499 1264 ntBASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 SPCS2P1-201ENST00000561636 679 ntBASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 LINC00554-201ENST00000564841 3011 ntBASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC144BQ3MJ40 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 AL662844.4-201ENST00000606367 2838 ntBASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 AC132872.4-202ENST00000622924 2756 ntBASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 AL596257.1-201ENST00000641463 2694 ntBASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 AC023141.5-201ENST00000458585 616 ntBASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC144BQ3MJ40 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 AC025678.2-201ENST00000562061 970 ntBASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 AL139327.4-201ENST00000612362 153 ntBASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms