Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC96Q2M329 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC96Q2M329 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC96Q2M329 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC96Q2M329 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC96Q2M329 LINC00895-201ENST00000629028 1637 ntBASIC19.41■□□□□ 0.7
CCDC96Q2M329 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC96Q2M329 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC96Q2M329 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC96Q2M329 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC96Q2M329 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC96Q2M329 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC96Q2M329 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC96Q2M329 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC96Q2M329 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC96Q2M329 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC96Q2M329 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC96Q2M329 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC96Q2M329 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC96Q2M329 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC96Q2M329 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC96Q2M329 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC96Q2M329 AC013467.2-201ENST00000605472 835 ntBASIC19.41■□□□□ 0.7
CCDC96Q2M329 AC106028.4-201ENST00000614509 607 ntBASIC19.41■□□□□ 0.7
CCDC96Q2M329 AP001094.4-201ENST00000579008 2176 ntBASIC19.41■□□□□ 0.7
CCDC96Q2M329 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC96Q2M329 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC96Q2M329 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC96Q2M329 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC96Q2M329 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC96Q2M329 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC96Q2M329 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC96Q2M329 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC96Q2M329 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC96Q2M329 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC96Q2M329 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC96Q2M329 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC96Q2M329 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC96Q2M329 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CCDC96Q2M329 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC96Q2M329 AL391256.1-201ENST00000443260 1855 ntBASIC19.4■□□□□ 0.7
CCDC96Q2M329 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC96Q2M329 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC96Q2M329 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC96Q2M329 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC96Q2M329 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC96Q2M329 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC96Q2M329 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC96Q2M329 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC96Q2M329 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC96Q2M329 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC96Q2M329 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CCDC96Q2M329 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC96Q2M329 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC96Q2M329 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC96Q2M329 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC96Q2M329 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC96Q2M329 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC96Q2M329 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC96Q2M329 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC96Q2M329 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC96Q2M329 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.39■□□□□ 0.7
CCDC96Q2M329 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC96Q2M329 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC96Q2M329 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.39■□□□□ 0.7
CCDC96Q2M329 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC96Q2M329 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC96Q2M329 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC96Q2M329 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC96Q2M329 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC96Q2M329 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC96Q2M329 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC96Q2M329 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC96Q2M329 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC96Q2M329 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC96Q2M329 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC96Q2M329 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC96Q2M329 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC96Q2M329 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC96Q2M329 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC96Q2M329 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC96Q2M329 AC109322.1-201ENST00000524499 1264 ntBASIC19.39■□□□□ 0.69
CCDC96Q2M329 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC96Q2M329 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC96Q2M329 AC009093.7-201ENST00000623853 1223 ntBASIC19.39■□□□□ 0.69
CCDC96Q2M329 LINC00628-201ENST00000628516 1289 ntBASIC19.39■□□□□ 0.69
CCDC96Q2M329 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC96Q2M329 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC96Q2M329 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC96Q2M329 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC96Q2M329 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC96Q2M329 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC96Q2M329 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC96Q2M329 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC96Q2M329 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC96Q2M329 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC96Q2M329 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC96Q2M329 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CCDC96Q2M329 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
CCDC96Q2M329 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms