Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 CNN2P2-201ENST00000443536 909 ntBASIC20.06■□□□□ 0.8
RFX7Q2KHR2 CNN2P3-201ENST00000450201 906 ntBASIC20.06■□□□□ 0.8
RFX7Q2KHR2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 AL136317.3-201ENST00000618497 906 ntBASIC20.06■□□□□ 0.8
RFX7Q2KHR2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 UBALD1-205ENST00000590891 2641 ntBASIC20.05■□□□□ 0.8
RFX7Q2KHR2 PCGF3-213ENST00000620529 1899 ntBASIC20.05■□□□□ 0.8
RFX7Q2KHR2 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 AC067863.1-201ENST00000494933 530 ntBASIC20.05■□□□□ 0.8
RFX7Q2KHR2 KRT8P23-201ENST00000560090 1207 ntBASIC20.05■□□□□ 0.8
RFX7Q2KHR2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX7Q2KHR2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 AL035633.1-201ENST00000406139 838 ntBASIC20.04■□□□□ 0.8
RFX7Q2KHR2 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.04■□□□□ 0.8
RFX7Q2KHR2 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 AC069262.1-201ENST00000539058 672 ntBASIC20.04■□□□□ 0.8
RFX7Q2KHR2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 AL118508.1-201ENST00000613502 2345 ntBASIC20.04■□□□□ 0.8
RFX7Q2KHR2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX7Q2KHR2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms