Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCNA1P78396 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.84■□□□□ 0.61
CCNA1P78396 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNA1P78396 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.84■□□□□ 0.61
CCNA1P78396 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNA1P78396 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNA1P78396 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNA1P78396 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CCNA1P78396 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCNA1P78396 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNA1P78396 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNA1P78396 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CCNA1P78396 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.84■□□□□ 0.61
CCNA1P78396 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNA1P78396 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.84■□□□□ 0.61
CCNA1P78396 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
CCNA1P78396 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.84■□□□□ 0.61
CCNA1P78396 AC093004.1-201ENST00000508850 424 ntBASIC18.84■□□□□ 0.61
CCNA1P78396 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
CCNA1P78396 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.84■□□□□ 0.61
CCNA1P78396 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNA1P78396 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCNA1P78396 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNA1P78396 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CCNA1P78396 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.84■□□□□ 0.61
CCNA1P78396 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNA1P78396 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCNA1P78396 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNA1P78396 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CCNA1P78396 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNA1P78396 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCNA1P78396 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNA1P78396 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCNA1P78396 NOC2LP1-202ENST00000452600 2235 ntBASIC18.84■□□□□ 0.61
CCNA1P78396 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.84■□□□□ 0.61
CCNA1P78396 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCNA1P78396 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCNA1P78396 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.83■□□□□ 0.61
CCNA1P78396 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCNA1P78396 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.83■□□□□ 0.61
CCNA1P78396 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.83■□□□□ 0.61
CCNA1P78396 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCNA1P78396 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCNA1P78396 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CCNA1P78396 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCNA1P78396 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.83■□□□□ 0.6
CCNA1P78396 AP006294.1-201ENST00000415407 339 ntBASIC18.83■□□□□ 0.6
CCNA1P78396 ARSEP1-201ENST00000420443 635 ntBASIC18.83■□□□□ 0.6
CCNA1P78396 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.83■□□□□ 0.6
CCNA1P78396 AC104794.3-201ENST00000566840 1248 ntBASIC18.83■□□□□ 0.6
CCNA1P78396 AC026979.3-201ENST00000607315 403 ntBASIC18.83■□□□□ 0.6
CCNA1P78396 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.83■□□□□ 0.6
CCNA1P78396 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.83■□□□□ 0.6
CCNA1P78396 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCNA1P78396 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCNA1P78396 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCNA1P78396 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.83■□□□□ 0.6
CCNA1P78396 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CCNA1P78396 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.83■□□□□ 0.6
CCNA1P78396 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCNA1P78396 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCNA1P78396 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCNA1P78396 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCNA1P78396 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.83■□□□□ 0.6
CCNA1P78396 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CCNA1P78396 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNA1P78396 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNA1P78396 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CCNA1P78396 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.82■□□□□ 0.6
CCNA1P78396 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCNA1P78396 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNA1P78396 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNA1P78396 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
CCNA1P78396 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.82■□□□□ 0.6
CCNA1P78396 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCNA1P78396 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.82■□□□□ 0.6
CCNA1P78396 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
CCNA1P78396 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.82■□□□□ 0.6
CCNA1P78396 GNAQP1-201ENST00000444815 1067 ntBASIC18.82■□□□□ 0.6
CCNA1P78396 AC011495.1-201ENST00000498085 584 ntBASIC18.82■□□□□ 0.6
CCNA1P78396 DOC2GP-202ENST00000514950 1163 ntBASIC18.82■□□□□ 0.6
CCNA1P78396 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CCNA1P78396 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.82■□□□□ 0.6
CCNA1P78396 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.82■□□□□ 0.6
CCNA1P78396 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.82■□□□□ 0.6
CCNA1P78396 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNA1P78396 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCNA1P78396 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCNA1P78396 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNA1P78396 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.82■□□□□ 0.6
CCNA1P78396 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCNA1P78396 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCNA1P78396 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCNA1P78396 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCNA1P78396 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNA1P78396 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNA1P78396 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNA1P78396 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.81■□□□□ 0.6
CCNA1P78396 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCNA1P78396 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms