Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ASIC1P78348 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ASIC1P78348 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ASIC1P78348 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.64■□□□□ 0.57
ASIC1P78348 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ASIC1P78348 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ASIC1P78348 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ASIC1P78348 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ASIC1P78348 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ASIC1P78348 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ASIC1P78348 HCG4-201ENST00000418983 998 ntBASIC18.64■□□□□ 0.57
ASIC1P78348 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.64■□□□□ 0.57
ASIC1P78348 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.64■□□□□ 0.57
ASIC1P78348 UNC93B6-202ENST00000528242 690 ntBASIC18.64■□□□□ 0.57
ASIC1P78348 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.64■□□□□ 0.57
ASIC1P78348 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.64■□□□□ 0.57
ASIC1P78348 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.64■□□□□ 0.57
ASIC1P78348 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ASIC1P78348 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.64■□□□□ 0.57
ASIC1P78348 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.64■□□□□ 0.57
ASIC1P78348 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ASIC1P78348 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.64■□□□□ 0.57
ASIC1P78348 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.64■□□□□ 0.57
ASIC1P78348 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.64■□□□□ 0.57
ASIC1P78348 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ASIC1P78348 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.64■□□□□ 0.57
ASIC1P78348 AL031731.1-201ENST00000642131 2094 ntBASIC18.64■□□□□ 0.57
ASIC1P78348 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ASIC1P78348 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ASIC1P78348 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ASIC1P78348 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ASIC1P78348 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.64■□□□□ 0.57
ASIC1P78348 GGT3P-204ENST00000453783 1664 ntBASIC18.63■□□□□ 0.57
ASIC1P78348 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ASIC1P78348 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
ASIC1P78348 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ASIC1P78348 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ASIC1P78348 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ASIC1P78348 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.63■□□□□ 0.57
ASIC1P78348 PRSS29P-201ENST00000440800 595 ntBASIC18.63■□□□□ 0.57
ASIC1P78348 RNA5SP415-201ENST00000517246 115 ntBASIC18.63■□□□□ 0.57
ASIC1P78348 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.63■□□□□ 0.57
ASIC1P78348 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ASIC1P78348 ACTL9-202ENST00000612068 1252 ntBASIC18.63■□□□□ 0.57
ASIC1P78348 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ASIC1P78348 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ASIC1P78348 HLA-A-201ENST00000376802 1334 ntBASIC18.63■□□□□ 0.57
ASIC1P78348 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ASIC1P78348 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ASIC1P78348 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
ASIC1P78348 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.63■□□□□ 0.57
ASIC1P78348 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ASIC1P78348 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ASIC1P78348 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ASIC1P78348 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ASIC1P78348 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ASIC1P78348 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ASIC1P78348 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ASIC1P78348 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ASIC1P78348 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.63■□□□□ 0.57
ASIC1P78348 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ASIC1P78348 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.63■□□□□ 0.57
ASIC1P78348 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ASIC1P78348 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ASIC1P78348 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ASIC1P78348 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
ASIC1P78348 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ASIC1P78348 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ASIC1P78348 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ASIC1P78348 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ASIC1P78348 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ASIC1P78348 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ASIC1P78348 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ASIC1P78348 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ASIC1P78348 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ASIC1P78348 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ASIC1P78348 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.62■□□□□ 0.57
ASIC1P78348 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.62■□□□□ 0.57
ASIC1P78348 AC009947.1-201ENST00000444350 727 ntBASIC18.62■□□□□ 0.57
ASIC1P78348 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ASIC1P78348 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.62■□□□□ 0.57
ASIC1P78348 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ASIC1P78348 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.62■□□□□ 0.57
ASIC1P78348 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.62■□□□□ 0.57
ASIC1P78348 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.62■□□□□ 0.57
ASIC1P78348 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.62■□□□□ 0.57
ASIC1P78348 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ASIC1P78348 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ASIC1P78348 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ASIC1P78348 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ASIC1P78348 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.62■□□□□ 0.57
ASIC1P78348 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ASIC1P78348 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ASIC1P78348 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ASIC1P78348 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ASIC1P78348 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.62■□□□□ 0.57
ASIC1P78348 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ASIC1P78348 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
ASIC1P78348 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.62■□□□□ 0.57
ASIC1P78348 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms