Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
CKS1BP61024 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS1BP61024 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS1BP61024 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CKS1BP61024 OS9-205ENST00000413095 1660 ntTSL 2 BASIC11.78□□□□□ -0.52
CKS1BP61024 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC11.78□□□□□ -0.52
CKS1BP61024 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS1BP61024 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CKS1BP61024 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS1BP61024 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC11.78□□□□□ -0.52
CKS1BP61024 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC11.78□□□□□ -0.52
CKS1BP61024 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC11.78□□□□□ -0.52
CKS1BP61024 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS1BP61024 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC11.78□□□□□ -0.52
CKS1BP61024 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS1BP61024 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS1BP61024 AC026748.1-201ENST00000624349 3251 ntBASIC11.78□□□□□ -0.52
CKS1BP61024 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC11.78□□□□□ -0.52
CKS1BP61024 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC11.78□□□□□ -0.52
CKS1BP61024 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC11.78□□□□□ -0.52
CKS1BP61024 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC11.78□□□□□ -0.52
CKS1BP61024 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS1BP61024 PRORSD1P-201ENST00000295112 541 ntBASIC11.78□□□□□ -0.52
CKS1BP61024 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS1BP61024 TSPY14P-201ENST00000303979 915 ntBASIC11.78□□□□□ -0.52
CKS1BP61024 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
CKS1BP61024 PRR31-201ENST00000371629 978 ntTSL 2 BASIC11.78□□□□□ -0.52
CKS1BP61024 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS1BP61024 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CKS1BP61024 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CKS1BP61024 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS1BP61024 GCSHP5-201ENST00000443090 522 ntBASIC11.78□□□□□ -0.52
CKS1BP61024 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC11.78□□□□□ -0.52
CKS1BP61024 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC11.78□□□□□ -0.52
CKS1BP61024 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS1BP61024 AC034232.1-201ENST00000506026 1064 ntBASIC11.78□□□□□ -0.52
CKS1BP61024 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC11.78□□□□□ -0.52
CKS1BP61024 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC11.78□□□□□ -0.52
CKS1BP61024 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC11.78□□□□□ -0.52
CKS1BP61024 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC11.78□□□□□ -0.52
CKS1BP61024 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC11.78□□□□□ -0.52
CKS1BP61024 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS1BP61024 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS1BP61024 FES-204ENST00000414248 2327 ntTSL 2 BASIC11.78□□□□□ -0.52
CKS1BP61024 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CKS1BP61024 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS1BP61024 KRT17P2-201ENST00000300992 1314 ntBASIC11.78□□□□□ -0.52
CKS1BP61024 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS1BP61024 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC11.78□□□□□ -0.52
CKS1BP61024 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS1BP61024 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
CKS1BP61024 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS1BP61024 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS1BP61024 MYO15B-237ENST00000642007 4893 ntBASIC11.78□□□□□ -0.52
CKS1BP61024 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS1BP61024 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS1BP61024 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC11.78□□□□□ -0.52
CKS1BP61024 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CKS1BP61024 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CKS1BP61024 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS1BP61024 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
CKS1BP61024 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CKS1BP61024 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC11.77□□□□□ -0.52
CKS1BP61024 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CKS1BP61024 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC11.77□□□□□ -0.52
CKS1BP61024 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC11.77□□□□□ -0.52
CKS1BP61024 AL513523.2-202ENST00000427283 2040 ntBASIC11.77□□□□□ -0.52
CKS1BP61024 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CKS1BP61024 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC11.77□□□□□ -0.52
CKS1BP61024 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC11.77□□□□□ -0.52
CKS1BP61024 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
CKS1BP61024 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
CKS1BP61024 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
CKS1BP61024 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC11.77□□□□□ -0.52
CKS1BP61024 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CKS1BP61024 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CKS1BP61024 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
CKS1BP61024 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS1BP61024 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
CKS1BP61024 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS1BP61024 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS1BP61024 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC11.77□□□□□ -0.53
CKS1BP61024 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CKS1BP61024 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS1BP61024 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS1BP61024 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CKS1BP61024 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC11.77□□□□□ -0.53
CKS1BP61024 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC11.77□□□□□ -0.53
CKS1BP61024 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
CKS1BP61024 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC11.77□□□□□ -0.53
CKS1BP61024 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
CKS1BP61024 REXO1L11P-201ENST00000620964 1927 ntBASIC11.77□□□□□ -0.53
CKS1BP61024 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CKS1BP61024 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CKS1BP61024 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS1BP61024 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CKS1BP61024 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC11.77□□□□□ -0.53
CKS1BP61024 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC11.77□□□□□ -0.53
CKS1BP61024 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CKS1BP61024 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms