Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.87□□□□□ -0.19
RIPPLY3P57055 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.87□□□□□ -0.19
RIPPLY3P57055 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RIPPLY3P57055 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.87□□□□□ -0.19
RIPPLY3P57055 MIR5572-201ENST00000583188 137 ntBASIC13.87□□□□□ -0.19
RIPPLY3P57055 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC13.87□□□□□ -0.19
RIPPLY3P57055 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.87□□□□□ -0.19
RIPPLY3P57055 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RIPPLY3P57055 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RIPPLY3P57055 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
RIPPLY3P57055 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RIPPLY3P57055 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RIPPLY3P57055 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RIPPLY3P57055 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RIPPLY3P57055 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RIPPLY3P57055 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.87□□□□□ -0.19
RIPPLY3P57055 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RIPPLY3P57055 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RIPPLY3P57055 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RIPPLY3P57055 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RIPPLY3P57055 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIPPLY3P57055 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 Z98044.1-201ENST00000632503 1764 ntBASIC13.86□□□□□ -0.19
RIPPLY3P57055 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIPPLY3P57055 AC018695.7-201ENST00000624587 2492 ntBASIC13.86□□□□□ -0.19
RIPPLY3P57055 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIPPLY3P57055 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RIPPLY3P57055 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RIPPLY3P57055 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIPPLY3P57055 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIPPLY3P57055 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIPPLY3P57055 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIPPLY3P57055 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIPPLY3P57055 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIPPLY3P57055 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIPPLY3P57055 KLF4P1-201ENST00000412782 1185 ntBASIC13.86□□□□□ -0.19
RIPPLY3P57055 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RIPPLY3P57055 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 CROCCP4-201ENST00000457096 498 ntBASIC13.86□□□□□ -0.19
RIPPLY3P57055 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIPPLY3P57055 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RIPPLY3P57055 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 AC009407.1-201ENST00000568958 598 ntBASIC13.86□□□□□ -0.19
RIPPLY3P57055 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIPPLY3P57055 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RIPPLY3P57055 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIPPLY3P57055 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIPPLY3P57055 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIPPLY3P57055 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RIPPLY3P57055 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIPPLY3P57055 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIPPLY3P57055 AL390961.4-201ENST00000623958 2535 ntBASIC13.86□□□□□ -0.19
RIPPLY3P57055 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIPPLY3P57055 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.86□□□□□ -0.19
RIPPLY3P57055 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RIPPLY3P57055 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIPPLY3P57055 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RIPPLY3P57055 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.85□□□□□ -0.19
RIPPLY3P57055 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIPPLY3P57055 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIPPLY3P57055 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
RIPPLY3P57055 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC13.85□□□□□ -0.19
RIPPLY3P57055 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIPPLY3P57055 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIPPLY3P57055 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIPPLY3P57055 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.85□□□□□ -0.19
RIPPLY3P57055 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIPPLY3P57055 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIPPLY3P57055 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
RIPPLY3P57055 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIPPLY3P57055 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIPPLY3P57055 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.85□□□□□ -0.19
RIPPLY3P57055 RPL17P11-201ENST00000417593 544 ntBASIC13.85□□□□□ -0.19
RIPPLY3P57055 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.85□□□□□ -0.19
RIPPLY3P57055 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RIPPLY3P57055 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.85□□□□□ -0.19
RIPPLY3P57055 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms