Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CDH12P55289 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH12P55289 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CDH12P55289 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH12P55289 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH12P55289 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH12P55289 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CDH12P55289 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH12P55289 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDH12P55289 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH12P55289 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CDH12P55289 AL365203.3-201ENST00000609742 2057 ntBASIC15.61■□□□□ 0.09
CDH12P55289 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CDH12P55289 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDH12P55289 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDH12P55289 AP005117.1-201ENST00000584346 1413 ntBASIC15.61■□□□□ 0.09
CDH12P55289 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH12P55289 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH12P55289 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH12P55289 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH12P55289 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH12P55289 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH12P55289 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH12P55289 LINC00982-205ENST00000420957 435 ntBASIC15.61■□□□□ 0.09
CDH12P55289 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CDH12P55289 AC132008.2-207ENST00000454517 770 ntBASIC15.61■□□□□ 0.09
CDH12P55289 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.61■□□□□ 0.09
CDH12P55289 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.61■□□□□ 0.09
CDH12P55289 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.61■□□□□ 0.09
CDH12P55289 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.61■□□□□ 0.09
CDH12P55289 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CDH12P55289 AP001269.4-201ENST00000609611 512 ntBASIC15.61■□□□□ 0.09
CDH12P55289 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.61■□□□□ 0.09
CDH12P55289 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CDH12P55289 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CDH12P55289 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH12P55289 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CDH12P55289 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH12P55289 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.61■□□□□ 0.09
CDH12P55289 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH12P55289 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH12P55289 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH12P55289 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDH12P55289 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CDH12P55289 AL596257.1-201ENST00000641463 2694 ntBASIC15.61■□□□□ 0.09
CDH12P55289 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH12P55289 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.6■□□□□ 0.09
CDH12P55289 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
CDH12P55289 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDH12P55289 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDH12P55289 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH12P55289 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH12P55289 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CDH12P55289 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH12P55289 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH12P55289 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH12P55289 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.6■□□□□ 0.09
CDH12P55289 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH12P55289 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CDH12P55289 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDH12P55289 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH12P55289 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CDH12P55289 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH12P55289 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
CDH12P55289 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDH12P55289 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDH12P55289 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH12P55289 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH12P55289 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.6■□□□□ 0.09
CDH12P55289 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDH12P55289 MIR1224-201ENST00000408193 85 ntBASIC15.6■□□□□ 0.09
CDH12P55289 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDH12P55289 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.6■□□□□ 0.09
CDH12P55289 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH12P55289 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.6■□□□□ 0.09
CDH12P55289 FOSL1P1-201ENST00000511041 816 ntBASIC15.6■□□□□ 0.09
CDH12P55289 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.6■□□□□ 0.09
CDH12P55289 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.6■□□□□ 0.09
CDH12P55289 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.6■□□□□ 0.09
CDH12P55289 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.6■□□□□ 0.09
CDH12P55289 AC063926.3-201ENST00000624734 5658 ntBASIC15.6■□□□□ 0.09
CDH12P55289 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CDH12P55289 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH12P55289 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH12P55289 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH12P55289 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH12P55289 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.6■□□□□ 0.09
CDH12P55289 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH12P55289 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CDH12P55289 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH12P55289 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH12P55289 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.6■□□□□ 0.09
CDH12P55289 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH12P55289 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDH12P55289 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.6■□□□□ 0.09
CDH12P55289 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.6■□□□□ 0.09
CDH12P55289 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH12P55289 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH12P55289 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH12P55289 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms