Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGCS2P54868 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.12■□□□□ 0.65
HMGCS2P54868 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
HMGCS2P54868 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.11■□□□□ 0.65
HMGCS2P54868 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
HMGCS2P54868 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCS2P54868 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCS2P54868 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
HMGCS2P54868 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
HMGCS2P54868 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.11■□□□□ 0.65
HMGCS2P54868 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HMGCS2P54868 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCS2P54868 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.11■□□□□ 0.65
HMGCS2P54868 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCS2P54868 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.11■□□□□ 0.65
HMGCS2P54868 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCS2P54868 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.11■□□□□ 0.65
HMGCS2P54868 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCS2P54868 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCS2P54868 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.11■□□□□ 0.65
HMGCS2P54868 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.11■□□□□ 0.65
HMGCS2P54868 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCS2P54868 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
HMGCS2P54868 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.11■□□□□ 0.65
HMGCS2P54868 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.11■□□□□ 0.65
HMGCS2P54868 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.11■□□□□ 0.65
HMGCS2P54868 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.11■□□□□ 0.65
HMGCS2P54868 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCS2P54868 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCS2P54868 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCS2P54868 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HMGCS2P54868 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.11■□□□□ 0.65
HMGCS2P54868 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCS2P54868 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
HMGCS2P54868 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCS2P54868 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.11■□□□□ 0.65
HMGCS2P54868 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCS2P54868 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCS2P54868 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGCS2P54868 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.1■□□□□ 0.65
HMGCS2P54868 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCS2P54868 AC138969.3-201ENST00000546612 1459 ntBASIC19.1■□□□□ 0.65
HMGCS2P54868 AC138932.2-201ENST00000548268 1459 ntBASIC19.1■□□□□ 0.65
HMGCS2P54868 AC126755.4-201ENST00000549796 1459 ntBASIC19.1■□□□□ 0.65
HMGCS2P54868 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.1■□□□□ 0.65
HMGCS2P54868 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HMGCS2P54868 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCS2P54868 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCS2P54868 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCS2P54868 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCS2P54868 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.1■□□□□ 0.65
HMGCS2P54868 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.1■□□□□ 0.65
HMGCS2P54868 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
HMGCS2P54868 AL512361.1-201ENST00000554200 418 ntBASIC19.1■□□□□ 0.65
HMGCS2P54868 AC004790.1-201ENST00000612686 536 ntBASIC19.1■□□□□ 0.65
HMGCS2P54868 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.1■□□□□ 0.65
HMGCS2P54868 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCS2P54868 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCS2P54868 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.1■□□□□ 0.65
HMGCS2P54868 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HMGCS2P54868 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCS2P54868 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.1■□□□□ 0.65
HMGCS2P54868 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS2P54868 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS2P54868 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS2P54868 AC068880.1-201ENST00000507289 2297 ntBASIC19.09■□□□□ 0.65
HMGCS2P54868 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS2P54868 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS2P54868 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
HMGCS2P54868 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS2P54868 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HMGCS2P54868 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS2P54868 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS2P54868 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS2P54868 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS2P54868 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS2P54868 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.09■□□□□ 0.65
HMGCS2P54868 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.09■□□□□ 0.65
HMGCS2P54868 RN7SL618P-201ENST00000477850 296 ntBASIC19.09■□□□□ 0.65
HMGCS2P54868 AC010336.2-201ENST00000564226 506 ntBASIC19.09■□□□□ 0.65
HMGCS2P54868 AL359881.2-201ENST00000602973 570 ntBASIC19.09■□□□□ 0.65
HMGCS2P54868 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.09■□□□□ 0.65
HMGCS2P54868 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.09■□□□□ 0.65
HMGCS2P54868 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS2P54868 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS2P54868 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS2P54868 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS2P54868 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
HMGCS2P54868 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCS2P54868 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGCS2P54868 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HMGCS2P54868 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGCS2P54868 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
HMGCS2P54868 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.08■□□□□ 0.65
HMGCS2P54868 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.08■□□□□ 0.65
HMGCS2P54868 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
HMGCS2P54868 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.08■□□□□ 0.65
HMGCS2P54868 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.08■□□□□ 0.65
HMGCS2P54868 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
HMGCS2P54868 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms