Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LHX2P50458 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.85□□□□□ -0.03
LHX2P50458 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LHX2P50458 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
LHX2P50458 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LHX2P50458 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LHX2P50458 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
LHX2P50458 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LHX2P50458 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LHX2P50458 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LHX2P50458 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LHX2P50458 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LHX2P50458 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LHX2P50458 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.85□□□□□ -0.03
LHX2P50458 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LHX2P50458 AC142381.1-201ENST00000426099 345 ntBASIC14.85□□□□□ -0.03
LHX2P50458 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.85□□□□□ -0.03
LHX2P50458 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.85□□□□□ -0.03
LHX2P50458 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.85□□□□□ -0.03
LHX2P50458 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.85□□□□□ -0.03
LHX2P50458 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LHX2P50458 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LHX2P50458 AP001059.3-201ENST00000619053 235 ntBASIC14.85□□□□□ -0.03
LHX2P50458 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.85□□□□□ -0.03
LHX2P50458 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.85□□□□□ -0.03
LHX2P50458 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.85□□□□□ -0.03
LHX2P50458 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LHX2P50458 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LHX2P50458 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.85□□□□□ -0.03
LHX2P50458 GGT4P-201ENST00000623672 1708 ntBASIC14.85□□□□□ -0.03
LHX2P50458 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LHX2P50458 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.85□□□□□ -0.03
LHX2P50458 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LHX2P50458 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LHX2P50458 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.85□□□□□ -0.03
LHX2P50458 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
LHX2P50458 GPAA1P2-202ENST00000606848 1787 ntBASIC14.85□□□□□ -0.03
LHX2P50458 AC073439.1-201ENST00000624121 1774 ntBASIC14.85□□□□□ -0.03
LHX2P50458 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LHX2P50458 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.85□□□□□ -0.03
LHX2P50458 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.85□□□□□ -0.03
LHX2P50458 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.85□□□□□ -0.03
LHX2P50458 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LHX2P50458 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LHX2P50458 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LHX2P50458 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LHX2P50458 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LHX2P50458 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.84□□□□□ -0.03
LHX2P50458 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.84□□□□□ -0.03
LHX2P50458 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LHX2P50458 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LHX2P50458 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LHX2P50458 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.84□□□□□ -0.03
LHX2P50458 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LHX2P50458 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LHX2P50458 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LHX2P50458 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LHX2P50458 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.84□□□□□ -0.03
LHX2P50458 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LHX2P50458 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LHX2P50458 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.84□□□□□ -0.03
LHX2P50458 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.84□□□□□ -0.03
LHX2P50458 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.84□□□□□ -0.03
LHX2P50458 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.84□□□□□ -0.03
LHX2P50458 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LHX2P50458 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.84□□□□□ -0.03
LHX2P50458 AL512356.2-201ENST00000546955 174 ntBASIC14.84□□□□□ -0.03
LHX2P50458 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.84□□□□□ -0.03
LHX2P50458 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.84□□□□□ -0.03
LHX2P50458 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LHX2P50458 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
LHX2P50458 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.84□□□□□ -0.03
LHX2P50458 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.84□□□□□ -0.03
LHX2P50458 AC020765.3-201ENST00000613051 740 ntBASIC14.84□□□□□ -0.03
LHX2P50458 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LHX2P50458 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
LHX2P50458 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.84□□□□□ -0.03
LHX2P50458 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
LHX2P50458 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LHX2P50458 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LHX2P50458 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LHX2P50458 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LHX2P50458 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LHX2P50458 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LHX2P50458 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LHX2P50458 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LHX2P50458 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.84□□□□□ -0.03
LHX2P50458 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.84□□□□□ -0.03
LHX2P50458 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LHX2P50458 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LHX2P50458 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.83□□□□□ -0.03
LHX2P50458 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.83□□□□□ -0.03
LHX2P50458 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
LHX2P50458 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
LHX2P50458 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
LHX2P50458 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
LHX2P50458 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.83□□□□□ -0.04
LHX2P50458 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.83□□□□□ -0.04
LHX2P50458 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
LHX2P50458 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms