Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.88□□□□□ -0.03
SRP9P49458 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 AP002414.2-201ENST00000591780 3365 ntBASIC14.88□□□□□ -0.03
SRP9P49458 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.88□□□□□ -0.03
SRP9P49458 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SRP9P49458 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.88□□□□□ -0.03
SRP9P49458 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.88□□□□□ -0.03
SRP9P49458 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 KLF4P1-201ENST00000412782 1185 ntBASIC14.88□□□□□ -0.03
SRP9P49458 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.88□□□□□ -0.03
SRP9P49458 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.88□□□□□ -0.03
SRP9P49458 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.88□□□□□ -0.03
SRP9P49458 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.88□□□□□ -0.03
SRP9P49458 SAPCD2P3-201ENST00000455031 850 ntBASIC14.88□□□□□ -0.03
SRP9P49458 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.88□□□□□ -0.03
SRP9P49458 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.88□□□□□ -0.03
SRP9P49458 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.88□□□□□ -0.03
SRP9P49458 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SRP9P49458 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.88□□□□□ -0.03
SRP9P49458 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.88□□□□□ -0.03
SRP9P49458 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 AL139327.4-201ENST00000612362 153 ntBASIC14.88□□□□□ -0.03
SRP9P49458 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.88□□□□□ -0.03
SRP9P49458 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SRP9P49458 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.88□□□□□ -0.03
SRP9P49458 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.88□□□□□ -0.03
SRP9P49458 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.88□□□□□ -0.03
SRP9P49458 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.88□□□□□ -0.03
SRP9P49458 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SRP9P49458 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP9P49458 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SRP9P49458 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.87□□□□□ -0.03
SRP9P49458 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SRP9P49458 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.87□□□□□ -0.03
SRP9P49458 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP9P49458 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SRP9P49458 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.87□□□□□ -0.03
SRP9P49458 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SRP9P49458 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP9P49458 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP9P49458 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP9P49458 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP9P49458 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.87□□□□□ -0.03
SRP9P49458 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP9P49458 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP9P49458 AC004870.1-201ENST00000315132 882 ntBASIC14.87□□□□□ -0.03
SRP9P49458 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SRP9P49458 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP9P49458 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.87□□□□□ -0.03
SRP9P49458 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP9P49458 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP9P49458 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.87□□□□□ -0.03
SRP9P49458 STK19B-204ENST00000512515 211 ntBASIC14.87□□□□□ -0.03
SRP9P49458 AC106795.1-205ENST00000512851 1056 ntBASIC14.87□□□□□ -0.03
SRP9P49458 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SRP9P49458 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SRP9P49458 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SRP9P49458 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.87□□□□□ -0.03
SRP9P49458 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SRP9P49458 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.87□□□□□ -0.03
SRP9P49458 REXO1L6P-202ENST00000619970 1078 ntBASIC14.87□□□□□ -0.03
SRP9P49458 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.87□□□□□ -0.03
SRP9P49458 AP000867.4-201ENST00000641616 219 ntBASIC14.87□□□□□ -0.03
SRP9P49458 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP9P49458 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SRP9P49458 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP9P49458 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.87□□□□□ -0.03
SRP9P49458 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP9P49458 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP9P49458 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.87□□□□□ -0.03
SRP9P49458 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.87□□□□□ -0.03
SRP9P49458 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SRP9P49458 LINC02228-204ENST00000642115 2962 ntBASIC14.87□□□□□ -0.03
SRP9P49458 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
SRP9P49458 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SRP9P49458 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.87□□□□□ -0.03
SRP9P49458 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP9P49458 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SRP9P49458 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP9P49458 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SRP9P49458 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRP9P49458 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRP9P49458 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRP9P49458 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms