Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HTR3AP46098 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTR3AP46098 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
HTR3AP46098 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTR3AP46098 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.47■□□□□ 0.07
HTR3AP46098 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HTR3AP46098 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.47■□□□□ 0.07
HTR3AP46098 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.47■□□□□ 0.07
HTR3AP46098 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.47■□□□□ 0.07
HTR3AP46098 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.47■□□□□ 0.07
HTR3AP46098 RPS2P1-201ENST00000434010 821 ntBASIC15.47■□□□□ 0.07
HTR3AP46098 TPM4P1-201ENST00000436100 807 ntBASIC15.47■□□□□ 0.07
HTR3AP46098 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.47■□□□□ 0.07
HTR3AP46098 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.47■□□□□ 0.07
HTR3AP46098 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.47■□□□□ 0.07
HTR3AP46098 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.47■□□□□ 0.07
HTR3AP46098 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.47■□□□□ 0.07
HTR3AP46098 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.47■□□□□ 0.07
HTR3AP46098 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.47■□□□□ 0.07
HTR3AP46098 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.47■□□□□ 0.07
HTR3AP46098 GGTLC5P-201ENST00000617623 998 ntBASIC15.47■□□□□ 0.07
HTR3AP46098 AC008735.5-201ENST00000623544 497 ntBASIC15.47■□□□□ 0.07
HTR3AP46098 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.47■□□□□ 0.07
HTR3AP46098 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTR3AP46098 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.47■□□□□ 0.07
HTR3AP46098 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTR3AP46098 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.47■□□□□ 0.07
HTR3AP46098 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.47■□□□□ 0.07
HTR3AP46098 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTR3AP46098 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
HTR3AP46098 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTR3AP46098 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTR3AP46098 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HTR3AP46098 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HTR3AP46098 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.46■□□□□ 0.07
HTR3AP46098 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
HTR3AP46098 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HTR3AP46098 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HTR3AP46098 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.46■□□□□ 0.07
HTR3AP46098 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HTR3AP46098 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HTR3AP46098 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HTR3AP46098 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.46■□□□□ 0.07
HTR3AP46098 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HTR3AP46098 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HTR3AP46098 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HTR3AP46098 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
HTR3AP46098 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HTR3AP46098 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.46■□□□□ 0.07
HTR3AP46098 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
HTR3AP46098 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HTR3AP46098 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
HTR3AP46098 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.46■□□□□ 0.07
HTR3AP46098 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.46■□□□□ 0.07
HTR3AP46098 PTCHD3P3-201ENST00000403073 906 ntBASIC15.46■□□□□ 0.07
HTR3AP46098 KRT18P27-201ENST00000427733 1299 ntBASIC15.46■□□□□ 0.07
HTR3AP46098 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.46■□□□□ 0.07
HTR3AP46098 PAWRP1-201ENST00000451083 565 ntBASIC15.46■□□□□ 0.07
HTR3AP46098 AC018712.1-201ENST00000455767 687 ntBASIC15.46■□□□□ 0.07
HTR3AP46098 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.46■□□□□ 0.07
HTR3AP46098 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.46■□□□□ 0.07
HTR3AP46098 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.46■□□□□ 0.07
HTR3AP46098 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.46■□□□□ 0.07
HTR3AP46098 AC136632.2-201ENST00000512891 861 ntBASIC15.46■□□□□ 0.07
HTR3AP46098 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.46■□□□□ 0.07
HTR3AP46098 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.46■□□□□ 0.07
HTR3AP46098 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.46■□□□□ 0.07
HTR3AP46098 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.46■□□□□ 0.07
HTR3AP46098 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.46■□□□□ 0.07
HTR3AP46098 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.46■□□□□ 0.07
HTR3AP46098 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
HTR3AP46098 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HTR3AP46098 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HTR3AP46098 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
HTR3AP46098 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
HTR3AP46098 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HTR3AP46098 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HTR3AP46098 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.46■□□□□ 0.07
HTR3AP46098 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
HTR3AP46098 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.46■□□□□ 0.07
HTR3AP46098 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HTR3AP46098 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.46■□□□□ 0.07
HTR3AP46098 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.46■□□□□ 0.07
HTR3AP46098 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HTR3AP46098 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HTR3AP46098 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.46■□□□□ 0.06
HTR3AP46098 AC099063.4-201ENST00000641099 1602 ntBASIC15.46■□□□□ 0.06
HTR3AP46098 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HTR3AP46098 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HTR3AP46098 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
HTR3AP46098 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.06
HTR3AP46098 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.46■□□□□ 0.06
HTR3AP46098 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HTR3AP46098 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HTR3AP46098 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
HTR3AP46098 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.45■□□□□ 0.06
HTR3AP46098 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.45■□□□□ 0.06
HTR3AP46098 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HTR3AP46098 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HTR3AP46098 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms