Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
GRIA1P42261 AF186996.4-201ENST00000467186 377 ntBASIC16.93■□□□□ 0.3
GRIA1P42261 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.93■□□□□ 0.3
GRIA1P42261 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.93■□□□□ 0.3
GRIA1P42261 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
GRIA1P42261 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.93■□□□□ 0.3
GRIA1P42261 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.93■□□□□ 0.3
GRIA1P42261 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.93■□□□□ 0.3
GRIA1P42261 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
GRIA1P42261 AC104692.2-201ENST00000603054 253 ntBASIC16.93■□□□□ 0.3
GRIA1P42261 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.93■□□□□ 0.3
GRIA1P42261 AC004790.2-201ENST00000623588 572 ntBASIC16.93■□□□□ 0.3
GRIA1P42261 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
GRIA1P42261 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.93■□□□□ 0.3
GRIA1P42261 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
GRIA1P42261 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GRIA1P42261 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GRIA1P42261 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GRIA1P42261 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
GRIA1P42261 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GRIA1P42261 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GRIA1P42261 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GRIA1P42261 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.93■□□□□ 0.3
GRIA1P42261 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA1P42261 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
GRIA1P42261 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
GRIA1P42261 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA1P42261 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA1P42261 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA1P42261 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.92■□□□□ 0.3
GRIA1P42261 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
GRIA1P42261 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA1P42261 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA1P42261 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.92■□□□□ 0.3
GRIA1P42261 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA1P42261 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA1P42261 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA1P42261 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA1P42261 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA1P42261 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA1P42261 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA1P42261 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.92■□□□□ 0.3
GRIA1P42261 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.92■□□□□ 0.3
GRIA1P42261 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.92■□□□□ 0.3
GRIA1P42261 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.92■□□□□ 0.3
GRIA1P42261 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.92■□□□□ 0.3
GRIA1P42261 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA1P42261 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.92■□□□□ 0.3
GRIA1P42261 AC108073.2-201ENST00000464002 357 ntBASIC16.92■□□□□ 0.3
GRIA1P42261 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.92■□□□□ 0.3
GRIA1P42261 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
GRIA1P42261 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.92■□□□□ 0.3
GRIA1P42261 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.92■□□□□ 0.3
GRIA1P42261 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
GRIA1P42261 MIR1199-201ENST00000621445 119 ntBASIC16.92■□□□□ 0.3
GRIA1P42261 AC117500.6-201ENST00000624871 588 ntBASIC16.92■□□□□ 0.3
GRIA1P42261 PAUPAR-201ENST00000630360 2965 ntBASIC16.92■□□□□ 0.3
GRIA1P42261 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA1P42261 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA1P42261 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.92■□□□□ 0.3
GRIA1P42261 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA1P42261 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA1P42261 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.92■□□□□ 0.3
GRIA1P42261 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA1P42261 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA1P42261 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.92■□□□□ 0.3
GRIA1P42261 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
GRIA1P42261 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
GRIA1P42261 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
GRIA1P42261 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.92■□□□□ 0.3
GRIA1P42261 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GRIA1P42261 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
GRIA1P42261 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GRIA1P42261 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.91■□□□□ 0.3
GRIA1P42261 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.91■□□□□ 0.3
GRIA1P42261 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GRIA1P42261 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GRIA1P42261 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.91■□□□□ 0.3
GRIA1P42261 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GRIA1P42261 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.91■□□□□ 0.3
GRIA1P42261 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GRIA1P42261 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.91■□□□□ 0.3
GRIA1P42261 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
GRIA1P42261 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GRIA1P42261 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.91■□□□□ 0.3
GRIA1P42261 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GRIA1P42261 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.91■□□□□ 0.3
GRIA1P42261 MIR7706-201ENST00000613747 67 ntBASIC16.91■□□□□ 0.3
GRIA1P42261 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
GRIA1P42261 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GRIA1P42261 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GRIA1P42261 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GRIA1P42261 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GRIA1P42261 AC129492.6-201ENST00000611383 1305 ntBASIC16.91■□□□□ 0.3
GRIA1P42261 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.91■□□□□ 0.3
GRIA1P42261 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GRIA1P42261 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GRIA1P42261 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
GRIA1P42261 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GRIA1P42261 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms