Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 PCDHA1-201ENST00000378133 2726 ntBASIC17.64■□□□□ 0.41
PCK1P35558 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PCK1P35558 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.64■□□□□ 0.41
PCK1P35558 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCK1P35558 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.64■□□□□ 0.41
PCK1P35558 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
PCK1P35558 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCK1P35558 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PCK1P35558 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PCK1P35558 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.64■□□□□ 0.41
PCK1P35558 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.64■□□□□ 0.41
PCK1P35558 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.64■□□□□ 0.41
PCK1P35558 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
PCK1P35558 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCK1P35558 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
PCK1P35558 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.63■□□□□ 0.41
PCK1P35558 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCK1P35558 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCK1P35558 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.63■□□□□ 0.41
PCK1P35558 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PCK1P35558 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCK1P35558 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCK1P35558 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.63■□□□□ 0.41
PCK1P35558 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.63■□□□□ 0.41
PCK1P35558 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.63■□□□□ 0.41
PCK1P35558 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.63■□□□□ 0.41
PCK1P35558 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PCK1P35558 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
PCK1P35558 AC079781.3-201ENST00000449110 356 ntBASIC17.63■□□□□ 0.41
PCK1P35558 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCK1P35558 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.63■□□□□ 0.41
PCK1P35558 AC105339.3-201ENST00000560043 636 ntBASIC17.63■□□□□ 0.41
PCK1P35558 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCK1P35558 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.63■□□□□ 0.41
PCK1P35558 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.63■□□□□ 0.41
PCK1P35558 PGM5P2-202ENST00000637225 1043 ntBASIC17.63■□□□□ 0.41
PCK1P35558 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.63■□□□□ 0.41
PCK1P35558 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCK1P35558 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCK1P35558 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.63■□□□□ 0.41
PCK1P35558 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCK1P35558 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.63■□□□□ 0.41
PCK1P35558 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.63■□□□□ 0.41
PCK1P35558 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCK1P35558 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PCK1P35558 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
PCK1P35558 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCK1P35558 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCK1P35558 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCK1P35558 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCK1P35558 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.62■□□□□ 0.41
PCK1P35558 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.62■□□□□ 0.41
PCK1P35558 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCK1P35558 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCK1P35558 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PCK1P35558 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCK1P35558 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCK1P35558 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.62■□□□□ 0.41
PCK1P35558 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
PCK1P35558 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCK1P35558 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.62■□□□□ 0.41
PCK1P35558 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.62■□□□□ 0.41
PCK1P35558 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.62■□□□□ 0.41
PCK1P35558 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCK1P35558 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.62■□□□□ 0.41
PCK1P35558 IGHV3-65-201ENST00000523210 341 ntBASIC17.62■□□□□ 0.41
PCK1P35558 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.62■□□□□ 0.41
PCK1P35558 MPDU1-223ENST00000582151 728 ntBASIC17.62■□□□□ 0.41
PCK1P35558 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.62■□□□□ 0.41
PCK1P35558 MIR1199-201ENST00000621445 119 ntBASIC17.62■□□□□ 0.41
PCK1P35558 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCK1P35558 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PCK1P35558 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCK1P35558 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCK1P35558 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCK1P35558 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCK1P35558 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
PCK1P35558 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCK1P35558 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCK1P35558 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCK1P35558 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCK1P35558 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.62■□□□□ 0.41
PCK1P35558 AC006538.1-201ENST00000567905 1585 ntBASIC17.62■□□□□ 0.41
PCK1P35558 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PCK1P35558 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCK1P35558 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.61■□□□□ 0.41
PCK1P35558 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCK1P35558 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCK1P35558 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.61■□□□□ 0.41
PCK1P35558 LINC00554-201ENST00000564841 3011 ntBASIC17.61■□□□□ 0.41
PCK1P35558 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCK1P35558 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCK1P35558 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCK1P35558 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.61■□□□□ 0.41
PCK1P35558 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.61■□□□□ 0.41
PCK1P35558 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.61■□□□□ 0.41
PCK1P35558 AC092171.3-201ENST00000610122 2651 ntBASIC17.61■□□□□ 0.41
PCK1P35558 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCK1P35558 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCK1P35558 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms