Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
RORAP35398 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.85■□□□□ 0.13
RORAP35398 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.85■□□□□ 0.13
RORAP35398 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RORAP35398 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RORAP35398 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RORAP35398 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RORAP35398 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RORAP35398 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.85■□□□□ 0.13
RORAP35398 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RORAP35398 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RORAP35398 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.84■□□□□ 0.13
RORAP35398 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.84■□□□□ 0.13
RORAP35398 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RORAP35398 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RORAP35398 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.84■□□□□ 0.13
RORAP35398 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RORAP35398 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RORAP35398 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.84■□□□□ 0.13
RORAP35398 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RORAP35398 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RORAP35398 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.84■□□□□ 0.13
RORAP35398 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RORAP35398 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RORAP35398 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RORAP35398 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RORAP35398 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
RORAP35398 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RORAP35398 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RORAP35398 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RORAP35398 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RORAP35398 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RORAP35398 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.84■□□□□ 0.13
RORAP35398 KRT18P32-201ENST00000424695 1287 ntBASIC15.84■□□□□ 0.13
RORAP35398 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.84■□□□□ 0.13
RORAP35398 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.84■□□□□ 0.13
RORAP35398 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RORAP35398 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RORAP35398 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RORAP35398 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.84■□□□□ 0.13
RORAP35398 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.84■□□□□ 0.13
RORAP35398 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
RORAP35398 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.84■□□□□ 0.13
RORAP35398 CYP2A7P1-201ENST00000595391 815 ntBASIC15.84■□□□□ 0.13
RORAP35398 AC084121.4-201ENST00000641598 221 ntBASIC15.84■□□□□ 0.13
RORAP35398 AF228730.8-201ENST00000642140 221 ntBASIC15.84■□□□□ 0.13
RORAP35398 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RORAP35398 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RORAP35398 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RORAP35398 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RORAP35398 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.84■□□□□ 0.13
RORAP35398 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RORAP35398 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
RORAP35398 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
RORAP35398 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RORAP35398 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.84■□□□□ 0.13
RORAP35398 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RORAP35398 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RORAP35398 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RORAP35398 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RORAP35398 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
RORAP35398 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.83■□□□□ 0.13
RORAP35398 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RORAP35398 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RORAP35398 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.13
RORAP35398 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RORAP35398 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RORAP35398 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RORAP35398 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RORAP35398 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
RORAP35398 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RORAP35398 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RORAP35398 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RORAP35398 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RORAP35398 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.83■□□□□ 0.12
RORAP35398 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.83■□□□□ 0.12
RORAP35398 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.83■□□□□ 0.12
RORAP35398 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.83■□□□□ 0.12
RORAP35398 GPS2P2-201ENST00000430745 888 ntBASIC15.83■□□□□ 0.12
RORAP35398 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.83■□□□□ 0.12
RORAP35398 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.83■□□□□ 0.12
RORAP35398 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RORAP35398 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.83■□□□□ 0.12
RORAP35398 KRT8P23-201ENST00000560090 1207 ntBASIC15.83■□□□□ 0.12
RORAP35398 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RORAP35398 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.83■□□□□ 0.12
RORAP35398 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.83■□□□□ 0.12
RORAP35398 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
RORAP35398 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.83■□□□□ 0.12
RORAP35398 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RORAP35398 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.83■□□□□ 0.12
RORAP35398 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.83■□□□□ 0.12
RORAP35398 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
RORAP35398 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
RORAP35398 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RORAP35398 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RORAP35398 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RORAP35398 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RORAP35398 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.83■□□□□ 0.12
RORAP35398 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms