Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.34□□□□□ -0.43
CKS2P33552 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC12.34□□□□□ -0.43
CKS2P33552 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CKS2P33552 AC022532.1-201ENST00000624563 1728 ntBASIC12.34□□□□□ -0.43
CKS2P33552 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
CKS2P33552 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CKS2P33552 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
CKS2P33552 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
CKS2P33552 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
CKS2P33552 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
CKS2P33552 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
CKS2P33552 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CKS2P33552 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.33□□□□□ -0.44
CKS2P33552 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
CKS2P33552 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.33□□□□□ -0.44
CKS2P33552 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CKS2P33552 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.33□□□□□ -0.44
CKS2P33552 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 Telomerase-vert.1-201ENST00000363312 438 ntBASIC12.33□□□□□ -0.44
CKS2P33552 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CKS2P33552 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC12.33□□□□□ -0.44
CKS2P33552 PENK-204ENST00000518770 863 ntTSL 2 BASIC12.33□□□□□ -0.44
CKS2P33552 PPOX-214ENST00000535223 664 ntTSL 3 BASIC12.33□□□□□ -0.44
CKS2P33552 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC12.33□□□□□ -0.44
CKS2P33552 AC026471.5-201ENST00000615068 467 ntBASIC12.33□□□□□ -0.44
CKS2P33552 AL359736.2-201ENST00000621992 437 ntBASIC12.33□□□□□ -0.44
CKS2P33552 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.33□□□□□ -0.44
CKS2P33552 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC12.33□□□□□ -0.44
CKS2P33552 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.33□□□□□ -0.44
CKS2P33552 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.33□□□□□ -0.44
CKS2P33552 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.33□□□□□ -0.44
CKS2P33552 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.33□□□□□ -0.44
CKS2P33552 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.33□□□□□ -0.44
CKS2P33552 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC12.33□□□□□ -0.44
CKS2P33552 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.33□□□□□ -0.44
CKS2P33552 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CKS2P33552 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS2P33552 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS2P33552 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS2P33552 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS2P33552 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.32□□□□□ -0.44
CKS2P33552 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CKS2P33552 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS2P33552 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS2P33552 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CKS2P33552 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CKS2P33552 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC12.32□□□□□ -0.44
CKS2P33552 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS2P33552 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS2P33552 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS2P33552 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS2P33552 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CKS2P33552 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS2P33552 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS2P33552 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CKS2P33552 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.32□□□□□ -0.44
CKS2P33552 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS2P33552 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC12.32□□□□□ -0.44
CKS2P33552 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CKS2P33552 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CKS2P33552 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.32□□□□□ -0.44
CKS2P33552 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CKS2P33552 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS2P33552 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC12.32□□□□□ -0.44
CKS2P33552 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS2P33552 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
CKS2P33552 ECEL1P2-202ENST00000465689 757 ntBASIC12.32□□□□□ -0.44
CKS2P33552 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CKS2P33552 AC128688.1-201ENST00000487626 519 ntBASIC12.32□□□□□ -0.44
CKS2P33552 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC12.32□□□□□ -0.44
CKS2P33552 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC12.32□□□□□ -0.44
CKS2P33552 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC12.32□□□□□ -0.44
CKS2P33552 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC12.32□□□□□ -0.44
CKS2P33552 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CKS2P33552 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms