Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.64■□□□□ 0.41
CHRNA3P32297 AC006557.2-201ENST00000592985 1240 ntBASIC17.64■□□□□ 0.41
CHRNA3P32297 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.64■□□□□ 0.41
CHRNA3P32297 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
CHRNA3P32297 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CHRNA3P32297 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA3P32297 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA3P32297 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA3P32297 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA3P32297 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CHRNA3P32297 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA3P32297 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.64■□□□□ 0.41
CHRNA3P32297 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.64■□□□□ 0.41
CHRNA3P32297 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA3P32297 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA3P32297 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA3P32297 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CHRNA3P32297 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.64■□□□□ 0.41
CHRNA3P32297 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA3P32297 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA3P32297 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA3P32297 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA3P32297 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA3P32297 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA3P32297 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA3P32297 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA3P32297 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA3P32297 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA3P32297 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA3P32297 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.63■□□□□ 0.41
CHRNA3P32297 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.63■□□□□ 0.41
CHRNA3P32297 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.63■□□□□ 0.41
CHRNA3P32297 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.63■□□□□ 0.41
CHRNA3P32297 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.63■□□□□ 0.41
CHRNA3P32297 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CHRNA3P32297 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.63■□□□□ 0.41
CHRNA3P32297 AC106730.1-201ENST00000566722 1090 ntBASIC17.63■□□□□ 0.41
CHRNA3P32297 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.63■□□□□ 0.41
CHRNA3P32297 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA3P32297 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA3P32297 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CHRNA3P32297 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA3P32297 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA3P32297 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA3P32297 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA3P32297 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.63■□□□□ 0.41
CHRNA3P32297 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA3P32297 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA3P32297 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA3P32297 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA3P32297 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA3P32297 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA3P32297 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA3P32297 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
CHRNA3P32297 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA3P32297 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA3P32297 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA3P32297 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA3P32297 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA3P32297 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA3P32297 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.62■□□□□ 0.41
CHRNA3P32297 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CHRNA3P32297 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA3P32297 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA3P32297 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA3P32297 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA3P32297 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.62■□□□□ 0.41
CHRNA3P32297 MIR574-201ENST00000385209 96 ntBASIC17.62■□□□□ 0.41
CHRNA3P32297 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.62■□□□□ 0.41
CHRNA3P32297 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CHRNA3P32297 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CHRNA3P32297 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.62■□□□□ 0.41
CHRNA3P32297 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.62■□□□□ 0.41
CHRNA3P32297 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.62■□□□□ 0.41
CHRNA3P32297 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA3P32297 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.62■□□□□ 0.41
CHRNA3P32297 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.62■□□□□ 0.41
CHRNA3P32297 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CHRNA3P32297 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.62■□□□□ 0.41
CHRNA3P32297 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.62■□□□□ 0.41
CHRNA3P32297 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA3P32297 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA3P32297 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA3P32297 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA3P32297 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CHRNA3P32297 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA3P32297 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA3P32297 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.62■□□□□ 0.41
CHRNA3P32297 NCF1C-201ENST00000438382 1427 ntBASIC17.62■□□□□ 0.41
CHRNA3P32297 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA3P32297 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA3P32297 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CHRNA3P32297 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA3P32297 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA3P32297 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA3P32297 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA3P32297 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.62■□□□□ 0.41
CHRNA3P32297 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CHRNA3P32297 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA3P32297 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms