Protein–RNA interactions for Protein: P32246

CCR1, C-C chemokine receptor type 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR1P32246 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCR1P32246 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CCR1P32246 WASH6P-202ENST00000359512 1437 ntBASIC17.26■□□□□ 0.35
CCR1P32246 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.26■□□□□ 0.35
CCR1P32246 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.26■□□□□ 0.35
CCR1P32246 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.26■□□□□ 0.35
CCR1P32246 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCR1P32246 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCR1P32246 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCR1P32246 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCR1P32246 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCR1P32246 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCR1P32246 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCR1P32246 AL031731.1-201ENST00000642131 2094 ntBASIC17.25■□□□□ 0.35
CCR1P32246 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.25■□□□□ 0.35
CCR1P32246 AKAP8P1-201ENST00000434743 1349 ntBASIC17.25■□□□□ 0.35
CCR1P32246 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCR1P32246 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCR1P32246 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCR1P32246 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCR1P32246 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCR1P32246 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.25■□□□□ 0.35
CCR1P32246 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCR1P32246 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
CCR1P32246 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCR1P32246 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCR1P32246 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCR1P32246 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCR1P32246 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.25■□□□□ 0.35
CCR1P32246 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.25■□□□□ 0.35
CCR1P32246 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.25■□□□□ 0.35
CCR1P32246 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.25■□□□□ 0.35
CCR1P32246 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.25■□□□□ 0.35
CCR1P32246 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.25■□□□□ 0.35
CCR1P32246 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CCR1P32246 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CCR1P32246 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCR1P32246 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.25■□□□□ 0.35
CCR1P32246 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCR1P32246 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCR1P32246 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCR1P32246 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCR1P32246 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCR1P32246 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CCR1P32246 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCR1P32246 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCR1P32246 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCR1P32246 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCR1P32246 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.25■□□□□ 0.35
CCR1P32246 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCR1P32246 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CCR1P32246 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCR1P32246 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.25■□□□□ 0.35
CCR1P32246 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.24■□□□□ 0.35
CCR1P32246 AC011676.5-201ENST00000624864 2660 ntBASIC17.24■□□□□ 0.35
CCR1P32246 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCR1P32246 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCR1P32246 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.24■□□□□ 0.35
CCR1P32246 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.24■□□□□ 0.35
CCR1P32246 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCR1P32246 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCR1P32246 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.24■□□□□ 0.35
CCR1P32246 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCR1P32246 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.24■□□□□ 0.35
CCR1P32246 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCR1P32246 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.24■□□□□ 0.35
CCR1P32246 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCR1P32246 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCR1P32246 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCR1P32246 AC211486.1-202ENST00000416371 468 ntBASIC17.24■□□□□ 0.35
CCR1P32246 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.24■□□□□ 0.35
CCR1P32246 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
CCR1P32246 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.24■□□□□ 0.35
CCR1P32246 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CCR1P32246 AC211476.1-201ENST00000503899 468 ntBASIC17.24■□□□□ 0.35
CCR1P32246 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.24■□□□□ 0.35
CCR1P32246 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCR1P32246 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCR1P32246 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.24■□□□□ 0.35
CCR1P32246 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCR1P32246 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.24■□□□□ 0.35
CCR1P32246 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCR1P32246 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCR1P32246 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.24■□□□□ 0.35
CCR1P32246 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCR1P32246 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCR1P32246 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCR1P32246 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCR1P32246 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCR1P32246 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.24■□□□□ 0.35
CCR1P32246 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CCR1P32246 UBALD1-205ENST00000590891 2641 ntBASIC17.24■□□□□ 0.35
CCR1P32246 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCR1P32246 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
CCR1P32246 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.24■□□□□ 0.35
CCR1P32246 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCR1P32246 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCR1P32246 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCR1P32246 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCR1P32246 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms