Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDF1P27539 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDF1P27539 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GDF1P27539 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
GDF1P27539 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDF1P27539 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDF1P27539 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GDF1P27539 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
GDF1P27539 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDF1P27539 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDF1P27539 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDF1P27539 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.12■□□□□ 0.01
GDF1P27539 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.12■□□□□ 0.01
GDF1P27539 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.12■□□□□ 0.01
GDF1P27539 AL627223.1-201ENST00000416693 442 ntBASIC15.12■□□□□ 0.01
GDF1P27539 KRT18P32-201ENST00000424695 1287 ntBASIC15.12■□□□□ 0.01
GDF1P27539 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.12■□□□□ 0.01
GDF1P27539 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.12■□□□□ 0.01
GDF1P27539 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GDF1P27539 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.12■□□□□ 0.01
GDF1P27539 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.12■□□□□ 0.01
GDF1P27539 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GDF1P27539 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.12■□□□□ 0.01
GDF1P27539 AC243562.1-201ENST00000560672 389 ntBASIC15.12■□□□□ 0.01
GDF1P27539 AC004449.1-201ENST00000564240 433 ntBASIC15.12■□□□□ 0.01
GDF1P27539 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.12■□□□□ 0.01
GDF1P27539 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.12■□□□□ 0.01
GDF1P27539 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.12■□□□□ 0.01
GDF1P27539 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.12■□□□□ 0.01
GDF1P27539 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.12■□□□□ 0.01
GDF1P27539 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDF1P27539 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDF1P27539 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
GDF1P27539 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
GDF1P27539 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDF1P27539 AC012313.1-201ENST00000593393 3059 ntBASIC15.12■□□□□ 0.01
GDF1P27539 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDF1P27539 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GDF1P27539 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GDF1P27539 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDF1P27539 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.12■□□□□ 0.01
GDF1P27539 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDF1P27539 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDF1P27539 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.11■□□□□ 0.01
GDF1P27539 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
GDF1P27539 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
GDF1P27539 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDF1P27539 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.11■□□□□ 0.01
GDF1P27539 AL671710.1-201ENST00000610245 2349 ntBASIC15.11■□□□□ 0.01
GDF1P27539 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
GDF1P27539 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
GDF1P27539 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDF1P27539 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GDF1P27539 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDF1P27539 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GDF1P27539 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDF1P27539 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GDF1P27539 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
GDF1P27539 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
GDF1P27539 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GDF1P27539 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
GDF1P27539 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.11■□□□□ 0.01
GDF1P27539 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDF1P27539 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
GDF1P27539 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.11■□□□□ 0.01
GDF1P27539 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDF1P27539 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.11■□□□□ 0.01
GDF1P27539 KRT18P34-201ENST00000488218 1270 ntBASIC15.11■□□□□ 0.01
GDF1P27539 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
GDF1P27539 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.11■□□□□ 0.01
GDF1P27539 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.11■□□□□ 0.01
GDF1P27539 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GDF1P27539 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.11■□□□□ 0.01
GDF1P27539 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDF1P27539 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDF1P27539 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GDF1P27539 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GDF1P27539 UXT-AS1-201ENST00000590504 1525 ntBASIC15.11■□□□□ 0.01
GDF1P27539 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.11■□□□□ 0.01
GDF1P27539 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
GDF1P27539 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDF1P27539 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDF1P27539 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDF1P27539 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GDF1P27539 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDF1P27539 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDF1P27539 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDF1P27539 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GDF1P27539 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDF1P27539 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDF1P27539 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDF1P27539 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GDF1P27539 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDF1P27539 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
GDF1P27539 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GDF1P27539 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDF1P27539 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.1■□□□□ 0.01
GDF1P27539 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDF1P27539 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.1■□□□□ 0.01
GDF1P27539 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms