Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VAMP1P23763 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.15□□□□□ -0.14
VAMP1P23763 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.15□□□□□ -0.14
VAMP1P23763 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.15□□□□□ -0.14
VAMP1P23763 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
VAMP1P23763 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.15□□□□□ -0.14
VAMP1P23763 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.15□□□□□ -0.14
VAMP1P23763 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.15□□□□□ -0.14
VAMP1P23763 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 INGX-201ENST00000359239 846 ntBASIC14.15□□□□□ -0.14
VAMP1P23763 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
VAMP1P23763 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.15□□□□□ -0.14
VAMP1P23763 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.15□□□□□ -0.14
VAMP1P23763 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
VAMP1P23763 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
VAMP1P23763 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.15□□□□□ -0.14
VAMP1P23763 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
VAMP1P23763 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
VAMP1P23763 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
VAMP1P23763 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
VAMP1P23763 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
VAMP1P23763 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.15□□□□□ -0.14
VAMP1P23763 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.15□□□□□ -0.14
VAMP1P23763 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.15□□□□□ -0.14
VAMP1P23763 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VAMP1P23763 AL391807.1-203ENST00000604392 2365 ntBASIC14.15□□□□□ -0.14
VAMP1P23763 AC097374.2-201ENST00000618617 1306 ntBASIC14.15□□□□□ -0.15
VAMP1P23763 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.15
VAMP1P23763 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAMP1P23763 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
VAMP1P23763 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAMP1P23763 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAMP1P23763 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
VAMP1P23763 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
VAMP1P23763 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAMP1P23763 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAMP1P23763 LINC02228-204ENST00000642115 2962 ntBASIC14.14□□□□□ -0.15
VAMP1P23763 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAMP1P23763 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VAMP1P23763 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
VAMP1P23763 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAMP1P23763 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
VAMP1P23763 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAMP1P23763 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VAMP1P23763 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VAMP1P23763 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.14□□□□□ -0.15
VAMP1P23763 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.14□□□□□ -0.15
VAMP1P23763 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
VAMP1P23763 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAMP1P23763 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAMP1P23763 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAMP1P23763 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.14□□□□□ -0.15
VAMP1P23763 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
VAMP1P23763 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.14□□□□□ -0.15
VAMP1P23763 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.14□□□□□ -0.15
VAMP1P23763 AC068472.1-201ENST00000474589 881 ntBASIC14.14□□□□□ -0.15
VAMP1P23763 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.14□□□□□ -0.15
VAMP1P23763 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VAMP1P23763 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.14□□□□□ -0.15
VAMP1P23763 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.14□□□□□ -0.15
VAMP1P23763 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms