Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
NFKB1P19838 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NFKB1P19838 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NFKB1P19838 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NFKB1P19838 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NFKB1P19838 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.97■□□□□ 0.31
NFKB1P19838 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NFKB1P19838 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NFKB1P19838 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.97■□□□□ 0.31
NFKB1P19838 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NFKB1P19838 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NFKB1P19838 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NFKB1P19838 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.97■□□□□ 0.31
NFKB1P19838 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
NFKB1P19838 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.97■□□□□ 0.31
NFKB1P19838 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
NFKB1P19838 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NFKB1P19838 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.97■□□□□ 0.31
NFKB1P19838 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NFKB1P19838 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NFKB1P19838 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NFKB1P19838 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
NFKB1P19838 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
NFKB1P19838 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NFKB1P19838 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NFKB1P19838 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NFKB1P19838 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.97■□□□□ 0.31
NFKB1P19838 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
NFKB1P19838 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.97■□□□□ 0.31
NFKB1P19838 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NFKB1P19838 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.97■□□□□ 0.31
NFKB1P19838 AC034105.1-201ENST00000563488 319 ntBASIC16.97■□□□□ 0.31
NFKB1P19838 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NFKB1P19838 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NFKB1P19838 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.97■□□□□ 0.31
NFKB1P19838 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.97■□□□□ 0.31
NFKB1P19838 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.97■□□□□ 0.31
NFKB1P19838 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
NFKB1P19838 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NFKB1P19838 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NFKB1P19838 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NFKB1P19838 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
NFKB1P19838 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NFKB1P19838 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.96■□□□□ 0.31
NFKB1P19838 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NFKB1P19838 IL9RP2-201ENST00000423948 1312 ntBASIC16.96■□□□□ 0.31
NFKB1P19838 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.96■□□□□ 0.31
NFKB1P19838 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NFKB1P19838 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NFKB1P19838 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NFKB1P19838 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NFKB1P19838 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NFKB1P19838 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
NFKB1P19838 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.96■□□□□ 0.31
NFKB1P19838 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NFKB1P19838 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NFKB1P19838 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
NFKB1P19838 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NFKB1P19838 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
NFKB1P19838 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NFKB1P19838 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NFKB1P19838 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NFKB1P19838 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
NFKB1P19838 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NFKB1P19838 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NFKB1P19838 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NFKB1P19838 HMGA1P7-201ENST00000406908 502 ntBASIC16.96■□□□□ 0.31
NFKB1P19838 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NFKB1P19838 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
NFKB1P19838 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.96■□□□□ 0.31
NFKB1P19838 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
NFKB1P19838 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
NFKB1P19838 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.96■□□□□ 0.31
NFKB1P19838 AC145285.3-201ENST00000564603 959 ntBASIC16.96■□□□□ 0.31
NFKB1P19838 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.96■□□□□ 0.31
NFKB1P19838 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.96■□□□□ 0.31
NFKB1P19838 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NFKB1P19838 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NFKB1P19838 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.96■□□□□ 0.31
NFKB1P19838 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.96■□□□□ 0.31
NFKB1P19838 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NFKB1P19838 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NFKB1P19838 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NFKB1P19838 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NFKB1P19838 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NFKB1P19838 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
NFKB1P19838 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NFKB1P19838 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NFKB1P19838 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
NFKB1P19838 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
NFKB1P19838 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
NFKB1P19838 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NFKB1P19838 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NFKB1P19838 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NFKB1P19838 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NFKB1P19838 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NFKB1P19838 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NFKB1P19838 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NFKB1P19838 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NFKB1P19838 GPAA1P2-202ENST00000606848 1787 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms