Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
BRAFP15056 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
BRAFP15056 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BRAFP15056 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BRAFP15056 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
BRAFP15056 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
BRAFP15056 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BRAFP15056 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BRAFP15056 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.23■□□□□ 0.35
BRAFP15056 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
BRAFP15056 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BRAFP15056 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
BRAFP15056 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.23■□□□□ 0.35
BRAFP15056 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
BRAFP15056 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
BRAFP15056 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.23■□□□□ 0.35
BRAFP15056 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.23■□□□□ 0.35
BRAFP15056 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BRAFP15056 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.23■□□□□ 0.35
BRAFP15056 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.23■□□□□ 0.35
BRAFP15056 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.23■□□□□ 0.35
BRAFP15056 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.23■□□□□ 0.35
BRAFP15056 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BRAFP15056 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BRAFP15056 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.23■□□□□ 0.35
BRAFP15056 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BRAFP15056 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
BRAFP15056 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BRAFP15056 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BRAFP15056 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.22■□□□□ 0.35
BRAFP15056 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.22■□□□□ 0.35
BRAFP15056 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BRAFP15056 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
BRAFP15056 AC068418.2-201ENST00000577309 3703 ntBASIC17.22■□□□□ 0.35
BRAFP15056 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BRAFP15056 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.22■□□□□ 0.35
BRAFP15056 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.22■□□□□ 0.35
BRAFP15056 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BRAFP15056 AC103564.2-201ENST00000432853 1299 ntBASIC17.22■□□□□ 0.35
BRAFP15056 FAM197Y8-203ENST00000450145 560 ntBASIC17.22■□□□□ 0.35
BRAFP15056 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
BRAFP15056 AP002490.2-201ENST00000524791 560 ntBASIC17.22■□□□□ 0.35
BRAFP15056 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.22■□□□□ 0.35
BRAFP15056 SART3-203ENST00000546611 1184 ntBASIC17.22■□□□□ 0.35
BRAFP15056 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.22■□□□□ 0.35
BRAFP15056 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.22■□□□□ 0.35
BRAFP15056 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.22■□□□□ 0.35
BRAFP15056 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.22■□□□□ 0.35
BRAFP15056 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.22■□□□□ 0.35
BRAFP15056 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.22■□□□□ 0.35
BRAFP15056 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BRAFP15056 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BRAFP15056 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BRAFP15056 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BRAFP15056 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BRAFP15056 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
BRAFP15056 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BRAFP15056 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
BRAFP15056 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.22■□□□□ 0.35
BRAFP15056 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
BRAFP15056 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
BRAFP15056 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.21■□□□□ 0.35
BRAFP15056 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
BRAFP15056 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.21■□□□□ 0.35
BRAFP15056 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BRAFP15056 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.21■□□□□ 0.35
BRAFP15056 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.21■□□□□ 0.35
BRAFP15056 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.21■□□□□ 0.35
BRAFP15056 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRAFP15056 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.21■□□□□ 0.35
BRAFP15056 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRAFP15056 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
BRAFP15056 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRAFP15056 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.21■□□□□ 0.35
BRAFP15056 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRAFP15056 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRAFP15056 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRAFP15056 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
BRAFP15056 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRAFP15056 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRAFP15056 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
BRAFP15056 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.21■□□□□ 0.35
BRAFP15056 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BRAFP15056 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.21■□□□□ 0.35
BRAFP15056 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
BRAFP15056 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.21■□□□□ 0.35
BRAFP15056 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.21■□□□□ 0.35
BRAFP15056 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.21■□□□□ 0.35
BRAFP15056 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.21■□□□□ 0.35
BRAFP15056 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BRAFP15056 AC148477.8-201ENST00000624298 468 ntBASIC17.21■□□□□ 0.35
BRAFP15056 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.21■□□□□ 0.35
BRAFP15056 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRAFP15056 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRAFP15056 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRAFP15056 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
BRAFP15056 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
BRAFP15056 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BRAFP15056 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.21■□□□□ 0.34
BRAFP15056 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms