Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA4P12838 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA4P12838 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.66□□□□□ -0.22
DEFA4P12838 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.66□□□□□ -0.22
DEFA4P12838 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.66□□□□□ -0.22
DEFA4P12838 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.66□□□□□ -0.22
DEFA4P12838 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.66□□□□□ -0.22
DEFA4P12838 AL445228.2-201ENST00000605589 952 ntBASIC13.66□□□□□ -0.22
DEFA4P12838 AC010331.1-201ENST00000611423 582 ntBASIC13.66□□□□□ -0.22
DEFA4P12838 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA4P12838 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
DEFA4P12838 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA4P12838 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA4P12838 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
DEFA4P12838 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.66□□□□□ -0.22
DEFA4P12838 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA4P12838 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA4P12838 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA4P12838 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.66□□□□□ -0.22
DEFA4P12838 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.66□□□□□ -0.22
DEFA4P12838 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA4P12838 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA4P12838 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.66□□□□□ -0.22
DEFA4P12838 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.66□□□□□ -0.22
DEFA4P12838 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA4P12838 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
DEFA4P12838 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.66□□□□□ -0.22
DEFA4P12838 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.66□□□□□ -0.22
DEFA4P12838 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA4P12838 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA4P12838 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.65□□□□□ -0.22
DEFA4P12838 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA4P12838 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA4P12838 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA4P12838 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA4P12838 AC103702.1-201ENST00000548801 2630 ntBASIC13.65□□□□□ -0.22
DEFA4P12838 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA4P12838 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA4P12838 AP002414.2-201ENST00000591780 3365 ntBASIC13.65□□□□□ -0.22
DEFA4P12838 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA4P12838 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA4P12838 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.65□□□□□ -0.22
DEFA4P12838 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
DEFA4P12838 INTS4P1-201ENST00000438455 1935 ntBASIC13.65□□□□□ -0.22
DEFA4P12838 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA4P12838 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.65□□□□□ -0.22
DEFA4P12838 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA4P12838 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.65□□□□□ -0.22
DEFA4P12838 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA4P12838 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA4P12838 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA4P12838 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.65□□□□□ -0.22
DEFA4P12838 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA4P12838 NUS1P2-201ENST00000417358 873 ntBASIC13.65□□□□□ -0.22
DEFA4P12838 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.65□□□□□ -0.22
DEFA4P12838 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC13.65□□□□□ -0.22
DEFA4P12838 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
DEFA4P12838 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.65□□□□□ -0.22
DEFA4P12838 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.65□□□□□ -0.22
DEFA4P12838 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.65□□□□□ -0.22
DEFA4P12838 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.65□□□□□ -0.22
DEFA4P12838 AC114341.1-201ENST00000618070 349 ntBASIC13.65□□□□□ -0.22
DEFA4P12838 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.65□□□□□ -0.22
DEFA4P12838 AD001527.2-201ENST00000622994 785 ntBASIC13.65□□□□□ -0.22
DEFA4P12838 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA4P12838 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
DEFA4P12838 AL135999.2-201ENST00000622438 1686 ntBASIC13.65□□□□□ -0.22
DEFA4P12838 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.65□□□□□ -0.22
DEFA4P12838 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.65□□□□□ -0.22
DEFA4P12838 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.65□□□□□ -0.22
DEFA4P12838 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
DEFA4P12838 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA4P12838 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
DEFA4P12838 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA4P12838 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA4P12838 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
DEFA4P12838 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
DEFA4P12838 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
DEFA4P12838 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA4P12838 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA4P12838 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA4P12838 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA4P12838 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.64□□□□□ -0.23
DEFA4P12838 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.64□□□□□ -0.23
DEFA4P12838 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
DEFA4P12838 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA4P12838 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA4P12838 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA4P12838 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA4P12838 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA4P12838 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA4P12838 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
DEFA4P12838 DBET-201ENST00000630918 3363 ntBASIC13.64□□□□□ -0.23
DEFA4P12838 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA4P12838 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
DEFA4P12838 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA4P12838 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA4P12838 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
DEFA4P12838 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
DEFA4P12838 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms