Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDH1P12830 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CDH1P12830 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
CDH1P12830 AL513523.2-202ENST00000427283 2040 ntBASIC16.31■□□□□ 0.2
CDH1P12830 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH1P12830 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH1P12830 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH1P12830 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH1P12830 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH1P12830 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH1P12830 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH1P12830 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH1P12830 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH1P12830 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH1P12830 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH1P12830 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.31■□□□□ 0.2
CDH1P12830 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH1P12830 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH1P12830 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH1P12830 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH1P12830 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH1P12830 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.3■□□□□ 0.2
CDH1P12830 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH1P12830 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
CDH1P12830 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH1P12830 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.3■□□□□ 0.2
CDH1P12830 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH1P12830 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH1P12830 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH1P12830 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH1P12830 AL645728.1-201ENST00000366221 2101 ntBASIC16.3■□□□□ 0.2
CDH1P12830 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CDH1P12830 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH1P12830 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH1P12830 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH1P12830 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH1P12830 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.3■□□□□ 0.2
CDH1P12830 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CDH1P12830 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH1P12830 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
CDH1P12830 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH1P12830 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
CDH1P12830 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.3■□□□□ 0.2
CDH1P12830 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH1P12830 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.3■□□□□ 0.2
CDH1P12830 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.3■□□□□ 0.2
CDH1P12830 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CDH1P12830 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH1P12830 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.3■□□□□ 0.2
CDH1P12830 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH1P12830 AC010654.1-201ENST00000615722 808 ntBASIC16.3■□□□□ 0.2
CDH1P12830 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.3■□□□□ 0.2
CDH1P12830 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH1P12830 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH1P12830 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.3■□□□□ 0.2
CDH1P12830 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH1P12830 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CDH1P12830 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH1P12830 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH1P12830 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH1P12830 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH1P12830 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CDH1P12830 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH1P12830 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH1P12830 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH1P12830 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH1P12830 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH1P12830 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH1P12830 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
CDH1P12830 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH1P12830 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH1P12830 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH1P12830 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH1P12830 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDH1P12830 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH1P12830 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.29■□□□□ 0.2
CDH1P12830 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDH1P12830 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH1P12830 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
CDH1P12830 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH1P12830 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDH1P12830 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
CDH1P12830 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.29■□□□□ 0.2
CDH1P12830 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDH1P12830 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH1P12830 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.29■□□□□ 0.2
CDH1P12830 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.29■□□□□ 0.2
CDH1P12830 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH1P12830 AP002490.2-201ENST00000524791 560 ntBASIC16.29■□□□□ 0.2
CDH1P12830 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.29■□□□□ 0.2
CDH1P12830 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH1P12830 Z83851.2-201ENST00000609564 659 ntBASIC16.29■□□□□ 0.2
CDH1P12830 AC120114.3-201ENST00000611923 658 ntBASIC16.29■□□□□ 0.2
CDH1P12830 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.29■□□□□ 0.2
CDH1P12830 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH1P12830 AC022188.1-201ENST00000620960 1664 ntBASIC16.29■□□□□ 0.2
CDH1P12830 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH1P12830 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CDH1P12830 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH1P12830 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms