Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP2P08253 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
MMP2P08253 AC079328.2-201ENST00000561241 3354 ntBASIC16.75■□□□□ 0.27
MMP2P08253 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
MMP2P08253 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP2P08253 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.75■□□□□ 0.27
MMP2P08253 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP2P08253 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP2P08253 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
MMP2P08253 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP2P08253 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
MMP2P08253 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.74■□□□□ 0.27
MMP2P08253 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MMP2P08253 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP2P08253 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MMP2P08253 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP2P08253 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.74■□□□□ 0.27
MMP2P08253 LINC01144-201ENST00000626198 1710 ntBASIC16.74■□□□□ 0.27
MMP2P08253 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP2P08253 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.74■□□□□ 0.27
MMP2P08253 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP2P08253 YBX2P1-201ENST00000394192 760 ntBASIC16.74■□□□□ 0.27
MMP2P08253 AC002056.1-201ENST00000395613 760 ntBASIC16.74■□□□□ 0.27
MMP2P08253 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.74■□□□□ 0.27
MMP2P08253 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.74■□□□□ 0.27
MMP2P08253 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
MMP2P08253 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MMP2P08253 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MMP2P08253 AL078644.1-201ENST00000609881 752 ntBASIC16.74■□□□□ 0.27
MMP2P08253 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MMP2P08253 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP2P08253 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP2P08253 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP2P08253 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MMP2P08253 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP2P08253 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
MMP2P08253 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP2P08253 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.74■□□□□ 0.27
MMP2P08253 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
MMP2P08253 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP2P08253 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.74■□□□□ 0.27
MMP2P08253 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.74■□□□□ 0.27
MMP2P08253 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP2P08253 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
MMP2P08253 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
MMP2P08253 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP2P08253 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP2P08253 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP2P08253 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MMP2P08253 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP2P08253 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
MMP2P08253 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.73■□□□□ 0.27
MMP2P08253 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.73■□□□□ 0.27
MMP2P08253 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
MMP2P08253 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.73■□□□□ 0.27
MMP2P08253 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.73■□□□□ 0.27
MMP2P08253 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP2P08253 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP2P08253 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP2P08253 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.73■□□□□ 0.27
MMP2P08253 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.73■□□□□ 0.27
MMP2P08253 AC112191.1-201ENST00000523689 701 ntBASIC16.73■□□□□ 0.27
MMP2P08253 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP2P08253 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.73■□□□□ 0.27
MMP2P08253 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.73■□□□□ 0.27
MMP2P08253 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
MMP2P08253 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.73■□□□□ 0.27
MMP2P08253 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MMP2P08253 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP2P08253 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP2P08253 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP2P08253 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP2P08253 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP2P08253 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MMP2P08253 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP2P08253 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MMP2P08253 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP2P08253 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
MMP2P08253 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MMP2P08253 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
MMP2P08253 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MMP2P08253 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP2P08253 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP2P08253 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP2P08253 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP2P08253 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP2P08253 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
MMP2P08253 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.72■□□□□ 0.27
MMP2P08253 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP2P08253 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
MMP2P08253 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP2P08253 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP2P08253 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.72■□□□□ 0.27
MMP2P08253 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
MMP2P08253 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP2P08253 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP2P08253 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MMP2P08253 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MMP2P08253 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.72■□□□□ 0.27
MMP2P08253 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms