Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SRPRAP08240 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRPRAP08240 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRPRAP08240 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRPRAP08240 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRPRAP08240 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRPRAP08240 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SRPRAP08240 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRPRAP08240 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SRPRAP08240 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.79■□□□□ 0.28
SRPRAP08240 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRPRAP08240 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SRPRAP08240 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SRPRAP08240 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.79■□□□□ 0.28
SRPRAP08240 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.79■□□□□ 0.28
SRPRAP08240 KLF2P3-201ENST00000451977 1087 ntBASIC16.79■□□□□ 0.28
SRPRAP08240 HLA-J-202ENST00000469281 1241 ntBASIC16.79■□□□□ 0.28
SRPRAP08240 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SRPRAP08240 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.79■□□□□ 0.28
SRPRAP08240 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SRPRAP08240 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRPRAP08240 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SRPRAP08240 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRPRAP08240 AP001094.4-201ENST00000579008 2176 ntBASIC16.79■□□□□ 0.28
SRPRAP08240 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.79■□□□□ 0.28
SRPRAP08240 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRPRAP08240 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SRPRAP08240 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SRPRAP08240 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRPRAP08240 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRPRAP08240 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRPRAP08240 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRPRAP08240 AC073439.1-201ENST00000624121 1774 ntBASIC16.79■□□□□ 0.28
SRPRAP08240 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SRPRAP08240 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SRPRAP08240 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.79■□□□□ 0.28
SRPRAP08240 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRPRAP08240 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SRPRAP08240 AL512652.2-201ENST00000625156 1716 ntBASIC16.79■□□□□ 0.28
SRPRAP08240 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRPRAP08240 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SRPRAP08240 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
SRPRAP08240 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.78■□□□□ 0.28
SRPRAP08240 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRPRAP08240 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.78■□□□□ 0.28
SRPRAP08240 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRPRAP08240 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRPRAP08240 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.78■□□□□ 0.28
SRPRAP08240 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRPRAP08240 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRPRAP08240 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRPRAP08240 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.78■□□□□ 0.28
SRPRAP08240 AC008677.1-201ENST00000519230 1561 ntBASIC16.78■□□□□ 0.28
SRPRAP08240 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRPRAP08240 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SRPRAP08240 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRPRAP08240 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRPRAP08240 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRPRAP08240 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRPRAP08240 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRPRAP08240 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRPRAP08240 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.78■□□□□ 0.28
SRPRAP08240 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.78■□□□□ 0.28
SRPRAP08240 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SRPRAP08240 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.78■□□□□ 0.28
SRPRAP08240 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.78■□□□□ 0.28
SRPRAP08240 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.78■□□□□ 0.28
SRPRAP08240 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.78■□□□□ 0.28
SRPRAP08240 MIR6080-201ENST00000617359 66 ntBASIC16.78■□□□□ 0.28
SRPRAP08240 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.78■□□□□ 0.28
SRPRAP08240 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SRPRAP08240 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SRPRAP08240 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.78■□□□□ 0.28
SRPRAP08240 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRPRAP08240 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRPRAP08240 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SRPRAP08240 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SRPRAP08240 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRPRAP08240 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRPRAP08240 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRPRAP08240 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRPRAP08240 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.78■□□□□ 0.28
SRPRAP08240 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRPRAP08240 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SRPRAP08240 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
SRPRAP08240 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SRPRAP08240 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.78■□□□□ 0.28
SRPRAP08240 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRPRAP08240 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRPRAP08240 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SRPRAP08240 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRPRAP08240 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRPRAP08240 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SRPRAP08240 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SRPRAP08240 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRPRAP08240 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SRPRAP08240 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SRPRAP08240 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SRPRAP08240 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SRPRAP08240 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms