Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC023274.1-201ENST00000418278 595 ntBASIC16.91■□□□□ 0.3
HLA-DQB2P05538 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 MIR3909-201ENST00000579518 119 ntBASIC16.91■□□□□ 0.3
HLA-DQB2P05538 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 ME2P1-201ENST00000426028 1970 ntBASIC16.91■□□□□ 0.3
HLA-DQB2P05538 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 AC092364.2-201ENST00000596710 2692 ntBASIC16.91■□□□□ 0.3
HLA-DQB2P05538 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 AC140658.5-201ENST00000438532 169 ntBASIC16.9■□□□□ 0.3
HLA-DQB2P05538 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 PGAM5P1-201ENST00000518923 814 ntBASIC16.9■□□□□ 0.3
HLA-DQB2P05538 AL009183.1-201ENST00000603760 355 ntBASIC16.9■□□□□ 0.3
HLA-DQB2P05538 AC068137.2-201ENST00000605408 478 ntBASIC16.9■□□□□ 0.3
HLA-DQB2P05538 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HLA-DQB2P05538 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DQB2P05538 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
HLA-DQB2P05538 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 PMS2P4-201ENST00000412466 1052 ntBASIC16.89■□□□□ 0.29
HLA-DQB2P05538 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 AC074386.1-202ENST00000463561 864 ntBASIC16.89■□□□□ 0.29
HLA-DQB2P05538 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 AC021097.1-201ENST00000607902 574 ntBASIC16.89■□□□□ 0.29
HLA-DQB2P05538 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 PCDH8P1-201ENST00000428983 2773 ntBASIC16.89■□□□□ 0.29
HLA-DQB2P05538 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB2P05538 PCGF3-213ENST00000620529 1899 ntBASIC16.88■□□□□ 0.29
HLA-DQB2P05538 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQB2P05538 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms