Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.67■□□□□ 0.1
PDGFAP04085 AL136317.3-201ENST00000618497 906 ntBASIC15.67■□□□□ 0.1
PDGFAP04085 AL035252.4-201ENST00000624174 288 ntBASIC15.67■□□□□ 0.1
PDGFAP04085 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFAP04085 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFAP04085 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFAP04085 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.67■□□□□ 0.1
PDGFAP04085 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.67■□□□□ 0.1
PDGFAP04085 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.67■□□□□ 0.1
PDGFAP04085 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PDGFAP04085 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PDGFAP04085 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFAP04085 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFAP04085 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFAP04085 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFAP04085 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PDGFAP04085 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PDGFAP04085 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFAP04085 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFAP04085 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFAP04085 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFAP04085 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PDGFAP04085 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFAP04085 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFAP04085 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
PDGFAP04085 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFAP04085 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.66■□□□□ 0.1
PDGFAP04085 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.66■□□□□ 0.1
PDGFAP04085 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFAP04085 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PDGFAP04085 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
PDGFAP04085 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFAP04085 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFAP04085 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFAP04085 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFAP04085 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFAP04085 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFAP04085 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFAP04085 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFAP04085 MIR943-201ENST00000401286 94 ntBASIC15.66■□□□□ 0.1
PDGFAP04085 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.66■□□□□ 0.1
PDGFAP04085 KRT18P32-201ENST00000424695 1287 ntBASIC15.66■□□□□ 0.1
PDGFAP04085 AC005034.1-201ENST00000426657 489 ntBASIC15.66■□□□□ 0.1
PDGFAP04085 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.66■□□□□ 0.1
PDGFAP04085 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFAP04085 AC002472.2-201ENST00000442739 958 ntBASIC15.66■□□□□ 0.1
PDGFAP04085 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.66■□□□□ 0.1
PDGFAP04085 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PDGFAP04085 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PDGFAP04085 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.66■□□□□ 0.1
PDGFAP04085 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.66■□□□□ 0.1
PDGFAP04085 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.66■□□□□ 0.1
PDGFAP04085 DUX4L17-201ENST00000557360 1267 ntBASIC15.66■□□□□ 0.1
PDGFAP04085 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.66■□□□□ 0.1
PDGFAP04085 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.66■□□□□ 0.1
PDGFAP04085 AL135744.1-201ENST00000565098 629 ntBASIC15.66■□□□□ 0.1
PDGFAP04085 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFAP04085 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFAP04085 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFAP04085 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.66■□□□□ 0.1
PDGFAP04085 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFAP04085 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFAP04085 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFAP04085 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFAP04085 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.66■□□□□ 0.1
PDGFAP04085 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFAP04085 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.66■□□□□ 0.1
PDGFAP04085 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PDGFAP04085 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.66■□□□□ 0.1
PDGFAP04085 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PDGFAP04085 TUBB3P1-201ENST00000405796 1332 ntBASIC15.66■□□□□ 0.1
PDGFAP04085 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.66■□□□□ 0.1
PDGFAP04085 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.66■□□□□ 0.1
PDGFAP04085 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFAP04085 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFAP04085 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.65■□□□□ 0.1
PDGFAP04085 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.65■□□□□ 0.1
PDGFAP04085 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFAP04085 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PDGFAP04085 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFAP04085 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFAP04085 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFAP04085 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PDGFAP04085 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.65■□□□□ 0.1
PDGFAP04085 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFAP04085 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFAP04085 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PDGFAP04085 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.65■□□□□ 0.1
PDGFAP04085 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.65■□□□□ 0.1
PDGFAP04085 AL512356.2-201ENST00000546955 174 ntBASIC15.65■□□□□ 0.1
PDGFAP04085 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.65■□□□□ 0.1
PDGFAP04085 RN7SL204P-201ENST00000582831 262 ntBASIC15.65■□□□□ 0.1
PDGFAP04085 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.65■□□□□ 0.1
PDGFAP04085 AL645728.2-201ENST00000641974 660 ntBASIC15.65■□□□□ 0.1
PDGFAP04085 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.65■□□□□ 0.1
PDGFAP04085 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.65■□□□□ 0.1
PDGFAP04085 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.65■□□□□ 0.1
PDGFAP04085 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFAP04085 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDGFAP04085 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms