Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFNA1P01562 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.26□□□□□ -0.29
IFNA1P01562 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC13.26□□□□□ -0.29
IFNA1P01562 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
IFNA1P01562 SLC25A1P2-201ENST00000430693 912 ntBASIC13.26□□□□□ -0.29
IFNA1P01562 AC026366.1-201ENST00000488803 879 ntBASIC13.26□□□□□ -0.29
IFNA1P01562 FDX2-206ENST00000492239 773 ntTSL 2 BASIC13.26□□□□□ -0.29
IFNA1P01562 DLX3-202ENST00000512495 834 ntTSL 2 BASIC13.26□□□□□ -0.29
IFNA1P01562 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
IFNA1P01562 MIR3917-201ENST00000580971 93 ntBASIC13.26□□□□□ -0.29
IFNA1P01562 IKBKGP1-201ENST00000612193 1073 ntBASIC13.26□□□□□ -0.29
IFNA1P01562 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.26□□□□□ -0.29
IFNA1P01562 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.26□□□□□ -0.29
IFNA1P01562 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
IFNA1P01562 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
IFNA1P01562 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFNA1P01562 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFNA1P01562 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
IFNA1P01562 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFNA1P01562 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFNA1P01562 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFNA1P01562 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
IFNA1P01562 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
IFNA1P01562 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.26□□□□□ -0.29
IFNA1P01562 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
IFNA1P01562 AC013268.4-201ENST00000637413 2228 ntBASIC13.25□□□□□ -0.29
IFNA1P01562 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
IFNA1P01562 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
IFNA1P01562 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
IFNA1P01562 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
IFNA1P01562 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
IFNA1P01562 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
IFNA1P01562 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
IFNA1P01562 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
IFNA1P01562 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.25□□□□□ -0.29
IFNA1P01562 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
IFNA1P01562 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
IFNA1P01562 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
IFNA1P01562 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
IFNA1P01562 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
IFNA1P01562 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
IFNA1P01562 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC13.25□□□□□ -0.29
IFNA1P01562 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.25□□□□□ -0.29
IFNA1P01562 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.25□□□□□ -0.29
IFNA1P01562 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
IFNA1P01562 AC096633.1-201ENST00000422446 749 ntBASIC13.25□□□□□ -0.29
IFNA1P01562 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
IFNA1P01562 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC13.25□□□□□ -0.29
IFNA1P01562 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC13.25□□□□□ -0.29
IFNA1P01562 AL353719.1-201ENST00000566847 864 ntBASIC13.25□□□□□ -0.29
IFNA1P01562 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC13.25□□□□□ -0.29
IFNA1P01562 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.25□□□□□ -0.29
IFNA1P01562 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC13.25□□□□□ -0.29
IFNA1P01562 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
IFNA1P01562 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.25□□□□□ -0.29
IFNA1P01562 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
IFNA1P01562 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
IFNA1P01562 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
IFNA1P01562 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.25□□□□□ -0.29
IFNA1P01562 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.25□□□□□ -0.29
IFNA1P01562 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
IFNA1P01562 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
IFNA1P01562 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
IFNA1P01562 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
IFNA1P01562 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
IFNA1P01562 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
IFNA1P01562 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
IFNA1P01562 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
IFNA1P01562 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
IFNA1P01562 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
IFNA1P01562 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
IFNA1P01562 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
IFNA1P01562 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
IFNA1P01562 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.24□□□□□ -0.29
IFNA1P01562 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFNA1P01562 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
IFNA1P01562 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFNA1P01562 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
IFNA1P01562 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFNA1P01562 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.24□□□□□ -0.29
IFNA1P01562 AC006449.6-201ENST00000612330 2296 ntBASIC13.24□□□□□ -0.29
IFNA1P01562 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IFNA1P01562 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
IFNA1P01562 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.24□□□□□ -0.29
IFNA1P01562 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFNA1P01562 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFNA1P01562 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFNA1P01562 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFNA1P01562 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFNA1P01562 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFNA1P01562 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
IFNA1P01562 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
IFNA1P01562 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IFNA1P01562 BX088651.1-201ENST00000540551 451 ntBASIC13.24□□□□□ -0.29
IFNA1P01562 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC13.24□□□□□ -0.29
IFNA1P01562 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IFNA1P01562 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC13.24□□□□□ -0.29
IFNA1P01562 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IFNA1P01562 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.24□□□□□ -0.29
IFNA1P01562 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms