Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LTN1O94822 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.76■■□□□ 1.07
LTN1O94822 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LTN1O94822 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
LTN1O94822 MXI1-205ENST00000393134 889 ntTSL 2 BASIC21.76■■□□□ 1.07
LTN1O94822 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
LTN1O94822 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC21.76■■□□□ 1.07
LTN1O94822 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC21.76■■□□□ 1.07
LTN1O94822 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC21.76■■□□□ 1.07
LTN1O94822 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC21.76■■□□□ 1.07
LTN1O94822 RPSAP52-203ENST00000622976 1023 ntBASIC21.76■■□□□ 1.07
LTN1O94822 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LTN1O94822 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC21.76■■□□□ 1.07
LTN1O94822 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LTN1O94822 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
LTN1O94822 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LTN1O94822 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
LTN1O94822 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC21.75■■□□□ 1.07
LTN1O94822 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
LTN1O94822 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LTN1O94822 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
LTN1O94822 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LTN1O94822 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC21.75■■□□□ 1.07
LTN1O94822 CLK3P2-201ENST00000427566 1453 ntBASIC21.75■■□□□ 1.07
LTN1O94822 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
LTN1O94822 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
LTN1O94822 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LTN1O94822 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC21.75■■□□□ 1.07
LTN1O94822 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC21.75■■□□□ 1.07
LTN1O94822 RRP7BP-205ENST00000566851 833 ntBASIC21.75■■□□□ 1.07
LTN1O94822 AC074044.1-201ENST00000609673 707 ntBASIC21.75■■□□□ 1.07
LTN1O94822 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LTN1O94822 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
LTN1O94822 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
LTN1O94822 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LTN1O94822 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
LTN1O94822 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LTN1O94822 AL133373.2-201ENST00000623187 2828 ntBASIC21.75■■□□□ 1.07
LTN1O94822 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LTN1O94822 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LTN1O94822 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC21.75■■□□□ 1.07
LTN1O94822 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.74■■□□□ 1.07
LTN1O94822 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC21.74■■□□□ 1.07
LTN1O94822 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.74■■□□□ 1.07
LTN1O94822 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LTN1O94822 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
LTN1O94822 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
LTN1O94822 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC21.74■■□□□ 1.07
LTN1O94822 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
LTN1O94822 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC21.74■■□□□ 1.07
LTN1O94822 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
LTN1O94822 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LTN1O94822 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
LTN1O94822 WFDC1-204ENST00000613603 549 ntBASIC21.74■■□□□ 1.07
LTN1O94822 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC21.74■■□□□ 1.07
LTN1O94822 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
LTN1O94822 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
LTN1O94822 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
LTN1O94822 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC21.74■■□□□ 1.07
LTN1O94822 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LTN1O94822 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC21.74■■□□□ 1.07
LTN1O94822 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC21.74■■□□□ 1.07
LTN1O94822 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LTN1O94822 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC21.74■■□□□ 1.07
LTN1O94822 GLI4-203ENST00000517468 963 ntTSL 5 BASIC21.74■■□□□ 1.07
LTN1O94822 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC21.74■■□□□ 1.07
LTN1O94822 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC21.74■■□□□ 1.07
LTN1O94822 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LTN1O94822 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LTN1O94822 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
LTN1O94822 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LTN1O94822 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC21.73■■□□□ 1.07
LTN1O94822 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC21.73■■□□□ 1.07
LTN1O94822 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LTN1O94822 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LTN1O94822 AC007389.4-201ENST00000454674 793 ntBASIC21.73■■□□□ 1.07
LTN1O94822 AL139010.1-201ENST00000454878 894 ntBASIC21.73■■□□□ 1.07
LTN1O94822 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LTN1O94822 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC21.73■■□□□ 1.07
LTN1O94822 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC21.73■■□□□ 1.07
LTN1O94822 MIR6805-201ENST00000615055 62 ntBASIC21.73■■□□□ 1.07
LTN1O94822 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LTN1O94822 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LTN1O94822 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LTN1O94822 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
LTN1O94822 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
LTN1O94822 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LTN1O94822 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LTN1O94822 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC21.72■■□□□ 1.07
LTN1O94822 AC087499.6-201ENST00000411576 835 ntBASIC21.72■■□□□ 1.07
LTN1O94822 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC21.72■■□□□ 1.07
LTN1O94822 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LTN1O94822 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC21.72■■□□□ 1.07
LTN1O94822 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC21.72■■□□□ 1.07
LTN1O94822 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LTN1O94822 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC21.72■■□□□ 1.07
LTN1O94822 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC21.72■■□□□ 1.07
LTN1O94822 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC21.72■■□□□ 1.07
LTN1O94822 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LTN1O94822 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms