Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST1O76090 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.46■□□□□ 0.39
BEST1O76090 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.46■□□□□ 0.39
BEST1O76090 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST1O76090 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BEST1O76090 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST1O76090 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.46■□□□□ 0.39
BEST1O76090 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST1O76090 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
BEST1O76090 KRT18P28-201ENST00000453838 1332 ntBASIC17.46■□□□□ 0.38
BEST1O76090 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.46■□□□□ 0.38
BEST1O76090 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
BEST1O76090 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
BEST1O76090 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BEST1O76090 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
BEST1O76090 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BEST1O76090 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.45■□□□□ 0.38
BEST1O76090 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BEST1O76090 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BEST1O76090 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.45■□□□□ 0.38
BEST1O76090 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BEST1O76090 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BEST1O76090 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BEST1O76090 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BEST1O76090 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.45■□□□□ 0.38
BEST1O76090 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BEST1O76090 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.45■□□□□ 0.38
BEST1O76090 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BEST1O76090 GPS2P2-201ENST00000430745 888 ntBASIC17.45■□□□□ 0.38
BEST1O76090 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.45■□□□□ 0.38
BEST1O76090 METTL21AP1-201ENST00000438852 635 ntBASIC17.45■□□□□ 0.38
BEST1O76090 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BEST1O76090 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BEST1O76090 AC023141.5-201ENST00000458585 616 ntBASIC17.45■□□□□ 0.38
BEST1O76090 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BEST1O76090 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
BEST1O76090 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.45■□□□□ 0.38
BEST1O76090 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.45■□□□□ 0.38
BEST1O76090 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.45■□□□□ 0.38
BEST1O76090 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BEST1O76090 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.45■□□□□ 0.38
BEST1O76090 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.45■□□□□ 0.38
BEST1O76090 FOXO1B-201ENST00000504678 1527 ntBASIC17.45■□□□□ 0.38
BEST1O76090 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BEST1O76090 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BEST1O76090 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.45■□□□□ 0.38
BEST1O76090 AC073439.1-201ENST00000624121 1774 ntBASIC17.45■□□□□ 0.38
BEST1O76090 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BEST1O76090 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BEST1O76090 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BEST1O76090 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.45■□□□□ 0.38
BEST1O76090 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BEST1O76090 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST1O76090 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
BEST1O76090 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST1O76090 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST1O76090 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST1O76090 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.44■□□□□ 0.38
BEST1O76090 AC005052.1-201ENST00000625181 2492 ntBASIC17.44■□□□□ 0.38
BEST1O76090 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST1O76090 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
BEST1O76090 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST1O76090 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BEST1O76090 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.44■□□□□ 0.38
BEST1O76090 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST1O76090 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST1O76090 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
BEST1O76090 UXT-AS1-201ENST00000590504 1525 ntBASIC17.44■□□□□ 0.38
BEST1O76090 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST1O76090 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST1O76090 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST1O76090 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST1O76090 MIR346-201ENST00000362234 95 ntBASIC17.44■□□□□ 0.38
BEST1O76090 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.44■□□□□ 0.38
BEST1O76090 AC109322.1-201ENST00000524499 1264 ntBASIC17.44■□□□□ 0.38
BEST1O76090 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BEST1O76090 AP000842.3-202ENST00000569238 1080 ntBASIC17.44■□□□□ 0.38
BEST1O76090 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST1O76090 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.44■□□□□ 0.38
BEST1O76090 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
BEST1O76090 AC084121.4-201ENST00000641598 221 ntBASIC17.44■□□□□ 0.38
BEST1O76090 AF228730.8-201ENST00000642140 221 ntBASIC17.44■□□□□ 0.38
BEST1O76090 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BEST1O76090 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST1O76090 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST1O76090 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST1O76090 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
BEST1O76090 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.44■□□□□ 0.38
BEST1O76090 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
BEST1O76090 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST1O76090 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
BEST1O76090 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
BEST1O76090 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
BEST1O76090 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BEST1O76090 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BEST1O76090 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BEST1O76090 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
BEST1O76090 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BEST1O76090 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.43■□□□□ 0.38
BEST1O76090 GGT3P-204ENST00000453783 1664 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms