Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL5O76039 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL5O76039 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.4■□□□□ 0.7
CDKL5O76039 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CDKL5O76039 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.4■□□□□ 0.7
CDKL5O76039 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.4■□□□□ 0.7
CDKL5O76039 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL5O76039 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL5O76039 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDKL5O76039 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDKL5O76039 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDKL5O76039 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.39■□□□□ 0.7
CDKL5O76039 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL5O76039 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL5O76039 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL5O76039 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL5O76039 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.39■□□□□ 0.69
CDKL5O76039 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CDKL5O76039 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL5O76039 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.39■□□□□ 0.69
CDKL5O76039 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CDKL5O76039 MIR3909-201ENST00000579518 119 ntBASIC19.39■□□□□ 0.69
CDKL5O76039 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL5O76039 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.39■□□□□ 0.69
CDKL5O76039 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL5O76039 AC010507.1-201ENST00000633895 436 ntBASIC19.39■□□□□ 0.69
CDKL5O76039 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.39■□□□□ 0.69
CDKL5O76039 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CDKL5O76039 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL5O76039 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL5O76039 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL5O76039 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL5O76039 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL5O76039 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CDKL5O76039 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.39■□□□□ 0.69
CDKL5O76039 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL5O76039 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL5O76039 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL5O76039 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL5O76039 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.38■□□□□ 0.69
CDKL5O76039 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL5O76039 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL5O76039 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL5O76039 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL5O76039 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL5O76039 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL5O76039 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CDKL5O76039 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL5O76039 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.38■□□□□ 0.69
CDKL5O76039 HMGA1P7-201ENST00000406908 502 ntBASIC19.38■□□□□ 0.69
CDKL5O76039 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.38■□□□□ 0.69
CDKL5O76039 RHOQP3-201ENST00000437982 621 ntBASIC19.38■□□□□ 0.69
CDKL5O76039 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL5O76039 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
CDKL5O76039 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.38■□□□□ 0.69
CDKL5O76039 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL5O76039 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL5O76039 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
CDKL5O76039 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
CDKL5O76039 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.38■□□□□ 0.69
CDKL5O76039 AC021097.1-201ENST00000607902 574 ntBASIC19.38■□□□□ 0.69
CDKL5O76039 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CDKL5O76039 AC020765.3-201ENST00000613051 740 ntBASIC19.38■□□□□ 0.69
CDKL5O76039 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.38■□□□□ 0.69
CDKL5O76039 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.38■□□□□ 0.69
CDKL5O76039 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.38■□□□□ 0.69
CDKL5O76039 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.38■□□□□ 0.69
CDKL5O76039 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL5O76039 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL5O76039 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CDKL5O76039 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
CDKL5O76039 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL5O76039 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CDKL5O76039 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL5O76039 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.37■□□□□ 0.69
CDKL5O76039 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.37■□□□□ 0.69
CDKL5O76039 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.37■□□□□ 0.69
CDKL5O76039 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL5O76039 AC006449.5-201ENST00000610658 2098 ntBASIC19.37■□□□□ 0.69
CDKL5O76039 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL5O76039 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL5O76039 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL5O76039 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL5O76039 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL5O76039 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.37■□□□□ 0.69
CDKL5O76039 IL9RP2-201ENST00000423948 1312 ntBASIC19.37■□□□□ 0.69
CDKL5O76039 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL5O76039 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL5O76039 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL5O76039 RNU1-129P-201ENST00000384064 167 ntBASIC19.37■□□□□ 0.69
CDKL5O76039 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.37■□□□□ 0.69
CDKL5O76039 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.37■□□□□ 0.69
CDKL5O76039 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CDKL5O76039 RPL13AP23-201ENST00000480739 586 ntBASIC19.37■□□□□ 0.69
CDKL5O76039 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.37■□□□□ 0.69
CDKL5O76039 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.37■□□□□ 0.69
CDKL5O76039 AC034105.1-201ENST00000563488 319 ntBASIC19.37■□□□□ 0.69
CDKL5O76039 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.37■□□□□ 0.69
CDKL5O76039 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CDKL5O76039 U1.21-201ENST00000580816 167 ntBASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms