Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.8■□□□□ 0.28
RFPL1O75677 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFPL1O75677 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.8■□□□□ 0.28
RFPL1O75677 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.8■□□□□ 0.28
RFPL1O75677 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFPL1O75677 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RFPL1O75677 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFPL1O75677 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFPL1O75677 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFPL1O75677 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFPL1O75677 LINC00554-201ENST00000564841 3011 ntBASIC16.79■□□□□ 0.28
RFPL1O75677 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFPL1O75677 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFPL1O75677 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.79■□□□□ 0.28
RFPL1O75677 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFPL1O75677 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFPL1O75677 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFPL1O75677 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RFPL1O75677 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFPL1O75677 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.79■□□□□ 0.28
RFPL1O75677 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFPL1O75677 ABCD1P5-201ENST00000445663 754 ntBASIC16.79■□□□□ 0.28
RFPL1O75677 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RFPL1O75677 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RFPL1O75677 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
RFPL1O75677 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.79■□□□□ 0.28
RFPL1O75677 AL353135.1-201ENST00000606729 504 ntBASIC16.79■□□□□ 0.28
RFPL1O75677 MIR7706-201ENST00000613747 67 ntBASIC16.79■□□□□ 0.28
RFPL1O75677 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFPL1O75677 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFPL1O75677 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RFPL1O75677 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFPL1O75677 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RFPL1O75677 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.79■□□□□ 0.28
RFPL1O75677 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFPL1O75677 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFPL1O75677 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFPL1O75677 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFPL1O75677 AL671710.1-201ENST00000610245 2349 ntBASIC16.79■□□□□ 0.28
RFPL1O75677 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFPL1O75677 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFPL1O75677 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFPL1O75677 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RFPL1O75677 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RFPL1O75677 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.78■□□□□ 0.28
RFPL1O75677 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFPL1O75677 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.78■□□□□ 0.28
RFPL1O75677 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.78■□□□□ 0.28
RFPL1O75677 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFPL1O75677 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.78■□□□□ 0.28
RFPL1O75677 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFPL1O75677 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RFPL1O75677 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
RFPL1O75677 BX842568.4-201ENST00000421222 227 ntBASIC16.78■□□□□ 0.28
RFPL1O75677 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.78■□□□□ 0.28
RFPL1O75677 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.78■□□□□ 0.28
RFPL1O75677 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.78■□□□□ 0.28
RFPL1O75677 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.78■□□□□ 0.28
RFPL1O75677 FGFR3P6-201ENST00000457012 610 ntBASIC16.78■□□□□ 0.28
RFPL1O75677 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFPL1O75677 RPL13AP23-201ENST00000480739 586 ntBASIC16.78■□□□□ 0.28
RFPL1O75677 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RFPL1O75677 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RFPL1O75677 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.78■□□□□ 0.28
RFPL1O75677 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
RFPL1O75677 MTDHP3-201ENST00000594186 672 ntBASIC16.78■□□□□ 0.28
RFPL1O75677 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFPL1O75677 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFPL1O75677 FAM215A-202ENST00000632077 792 ntBASIC16.78■□□□□ 0.28
RFPL1O75677 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RFPL1O75677 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFPL1O75677 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFPL1O75677 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RFPL1O75677 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.78■□□□□ 0.28
RFPL1O75677 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFPL1O75677 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFPL1O75677 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFPL1O75677 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RFPL1O75677 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RFPL1O75677 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFPL1O75677 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RFPL1O75677 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.78■□□□□ 0.28
RFPL1O75677 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.78■□□□□ 0.28
RFPL1O75677 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFPL1O75677 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFPL1O75677 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFPL1O75677 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFPL1O75677 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.77■□□□□ 0.28
RFPL1O75677 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.77■□□□□ 0.28
RFPL1O75677 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.77■□□□□ 0.28
RFPL1O75677 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RFPL1O75677 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFPL1O75677 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFPL1O75677 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFPL1O75677 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFPL1O75677 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFPL1O75677 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RFPL1O75677 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFPL1O75677 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFPL1O75677 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms