Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.07■□□□□ 0
PTP4A3O75365 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.07■□□□□ 0
PTP4A3O75365 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.07■□□□□ 0
PTP4A3O75365 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PTP4A3O75365 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PTP4A3O75365 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PTP4A3O75365 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.07■□□□□ 0
PTP4A3O75365 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.07■□□□□ 0
PTP4A3O75365 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.07■□□□□ 0
PTP4A3O75365 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
PTP4A3O75365 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.07■□□□□ 0
PTP4A3O75365 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.06■□□□□ 0
PTP4A3O75365 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.06■□□□□ 0
PTP4A3O75365 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.06■□□□□ 0
PTP4A3O75365 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
PTP4A3O75365 AC073621.1-201ENST00000392730 636 ntBASIC15.06■□□□□ 0
PTP4A3O75365 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.06■□□□□ 0
PTP4A3O75365 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.06■□□□□ 0
PTP4A3O75365 ELK2BP-201ENST00000415014 1224 ntBASIC15.06■□□□□ 0
PTP4A3O75365 LAGE3P1-201ENST00000425356 484 ntBASIC15.06■□□□□ 0
PTP4A3O75365 KRT18P27-201ENST00000427733 1299 ntBASIC15.06■□□□□ 0
PTP4A3O75365 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.06■□□□□ 0
PTP4A3O75365 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.06■□□□□ 0
PTP4A3O75365 AC006557.2-201ENST00000592985 1240 ntBASIC15.06■□□□□ 0
PTP4A3O75365 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.06■□□□□ 0
PTP4A3O75365 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.06■□□□□ 0
PTP4A3O75365 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.06■□□□□ 0
PTP4A3O75365 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PTP4A3O75365 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.06■□□□□ 0
PTP4A3O75365 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.06■□□□□ 0
PTP4A3O75365 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.06■□□□□ 0
PTP4A3O75365 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 GPAA1P2-202ENST00000606848 1787 ntBASIC15.06■□□□□ 0
PTP4A3O75365 AC023824.1-201ENST00000562945 2975 ntBASIC15.06■□□□□ 0
PTP4A3O75365 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.06■□□□□ 0
PTP4A3O75365 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PTP4A3O75365 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.05■□□□□ 0
PTP4A3O75365 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.05■□□□□ 0
PTP4A3O75365 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
PTP4A3O75365 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PTP4A3O75365 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PTP4A3O75365 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.05■□□□□ 0
PTP4A3O75365 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
PTP4A3O75365 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
PTP4A3O75365 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
PTP4A3O75365 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PTP4A3O75365 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PTP4A3O75365 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PTP4A3O75365 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.05■□□□□ -0
PTP4A3O75365 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.05■□□□□ -0
PTP4A3O75365 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.05■□□□□ -0
PTP4A3O75365 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.05■□□□□ -0
PTP4A3O75365 SAPCD2P3-201ENST00000455031 850 ntBASIC15.05■□□□□ -0
PTP4A3O75365 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.05■□□□□ -0
PTP4A3O75365 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.05■□□□□ -0
PTP4A3O75365 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.05■□□□□ -0
PTP4A3O75365 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.05■□□□□ -0
PTP4A3O75365 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PTP4A3O75365 GGTLC5P-201ENST00000617623 998 ntBASIC15.05■□□□□ -0
PTP4A3O75365 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.05■□□□□ -0
PTP4A3O75365 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.05■□□□□ -0
PTP4A3O75365 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.05■□□□□ -0
PTP4A3O75365 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.05■□□□□ -0
PTP4A3O75365 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.05■□□□□ -0
PTP4A3O75365 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.05■□□□□ -0
PTP4A3O75365 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.05■□□□□ -0
PTP4A3O75365 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PTP4A3O75365 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
PTP4A3O75365 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.05■□□□□ -0
PTP4A3O75365 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.05■□□□□ -0
PTP4A3O75365 LINC01144-201ENST00000626198 1710 ntBASIC15.05■□□□□ -0
PTP4A3O75365 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.05■□□□□ -0
PTP4A3O75365 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.05■□□□□ -0
PTP4A3O75365 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.05■□□□□ -0
PTP4A3O75365 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms