Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC007064.4-201ENST00000637740 555 ntBASIC16.67■□□□□ 0.26
LDB2O43679 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.67■□□□□ 0.26
LDB2O43679 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LDB2O43679 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LDB2O43679 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDB2O43679 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LDB2O43679 AC025580.3-201ENST00000617932 1424 ntBASIC16.67■□□□□ 0.26
LDB2O43679 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.67■□□□□ 0.26
LDB2O43679 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LDB2O43679 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
LDB2O43679 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDB2O43679 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.67■□□□□ 0.26
LDB2O43679 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDB2O43679 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LDB2O43679 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDB2O43679 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.66■□□□□ 0.26
LDB2O43679 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.66■□□□□ 0.26
LDB2O43679 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LDB2O43679 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB2O43679 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB2O43679 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LDB2O43679 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LDB2O43679 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LDB2O43679 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB2O43679 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB2O43679 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB2O43679 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB2O43679 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB2O43679 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
LDB2O43679 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB2O43679 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB2O43679 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LDB2O43679 PMS2P4-201ENST00000412466 1052 ntBASIC16.66■□□□□ 0.26
LDB2O43679 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.66■□□□□ 0.26
LDB2O43679 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LDB2O43679 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.66■□□□□ 0.26
LDB2O43679 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.66■□□□□ 0.26
LDB2O43679 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LDB2O43679 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.66■□□□□ 0.26
LDB2O43679 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.66■□□□□ 0.26
LDB2O43679 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.66■□□□□ 0.26
LDB2O43679 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.66■□□□□ 0.26
LDB2O43679 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB2O43679 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LDB2O43679 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
LDB2O43679 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB2O43679 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB2O43679 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
LDB2O43679 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
LDB2O43679 BCAR1-209ENST00000546196 1340 ntBASIC16.66■□□□□ 0.26
LDB2O43679 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LDB2O43679 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB2O43679 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LDB2O43679 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LDB2O43679 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.65■□□□□ 0.26
LDB2O43679 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
LDB2O43679 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDB2O43679 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDB2O43679 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDB2O43679 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LDB2O43679 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDB2O43679 PCGF3-213ENST00000620529 1899 ntBASIC16.65■□□□□ 0.26
LDB2O43679 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDB2O43679 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.65■□□□□ 0.26
LDB2O43679 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDB2O43679 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.65■□□□□ 0.26
LDB2O43679 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDB2O43679 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDB2O43679 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LDB2O43679 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.65■□□□□ 0.26
LDB2O43679 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.65■□□□□ 0.26
LDB2O43679 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.65■□□□□ 0.26
LDB2O43679 KRT19P2-202ENST00000557173 1012 ntBASIC16.65■□□□□ 0.26
LDB2O43679 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.65■□□□□ 0.26
LDB2O43679 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.65■□□□□ 0.26
LDB2O43679 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDB2O43679 AC140113.2-201ENST00000604370 208 ntBASIC16.65■□□□□ 0.26
LDB2O43679 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDB2O43679 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDB2O43679 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDB2O43679 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.65■□□□□ 0.26
LDB2O43679 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LDB2O43679 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.65■□□□□ 0.26
LDB2O43679 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDB2O43679 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDB2O43679 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDB2O43679 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDB2O43679 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.65■□□□□ 0.26
LDB2O43679 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LDB2O43679 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LDB2O43679 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
LDB2O43679 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.65■□□□□ 0.26
LDB2O43679 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.65■□□□□ 0.26
LDB2O43679 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
LDB2O43679 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
LDB2O43679 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LDB2O43679 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LDB2O43679 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LDB2O43679 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
LDB2O43679 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms