Protein–RNA interactions for Protein: O14543

SOCS3, Suppressor of cytokine signaling 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3O14543 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC12.6□□□□□ -0.39
SOCS3O14543 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.6□□□□□ -0.39
SOCS3O14543 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
SOCS3O14543 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SOCS3O14543 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SOCS3O14543 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SOCS3O14543 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.6□□□□□ -0.39
SOCS3O14543 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SOCS3O14543 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SOCS3O14543 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SOCS3O14543 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SOCS3O14543 AL662844.4-201ENST00000606367 2838 ntBASIC12.6□□□□□ -0.39
SOCS3O14543 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC12.6□□□□□ -0.39
SOCS3O14543 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SOCS3O14543 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SOCS3O14543 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SOCS3O14543 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC12.6□□□□□ -0.39
SOCS3O14543 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SOCS3O14543 MTHFR-217ENST00000641820 1569 ntBASIC12.6□□□□□ -0.39
SOCS3O14543 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SOCS3O14543 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SOCS3O14543 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SOCS3O14543 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SOCS3O14543 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SOCS3O14543 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SOCS3O14543 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SOCS3O14543 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC12.6□□□□□ -0.39
SOCS3O14543 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SOCS3O14543 BANP-204ENST00000393208 2283 ntTSL 2 BASIC12.59□□□□□ -0.39
SOCS3O14543 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SOCS3O14543 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC12.59□□□□□ -0.39
SOCS3O14543 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
SOCS3O14543 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC12.59□□□□□ -0.39
SOCS3O14543 AC026691.1-201ENST00000602502 2017 ntBASIC12.59□□□□□ -0.39
SOCS3O14543 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC12.59□□□□□ -0.39
SOCS3O14543 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SOCS3O14543 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SOCS3O14543 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SOCS3O14543 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SOCS3O14543 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SOCS3O14543 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SOCS3O14543 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.59□□□□□ -0.39
SOCS3O14543 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SOCS3O14543 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SOCS3O14543 RPS2P28-201ENST00000314255 741 ntBASIC12.59□□□□□ -0.39
SOCS3O14543 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SOCS3O14543 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SOCS3O14543 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.59□□□□□ -0.39
SOCS3O14543 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.59□□□□□ -0.39
SOCS3O14543 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SOCS3O14543 HCG4-201ENST00000418983 998 ntBASIC12.59□□□□□ -0.39
SOCS3O14543 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.59□□□□□ -0.39
SOCS3O14543 AC087641.1-201ENST00000557561 1021 ntBASIC12.59□□□□□ -0.39
SOCS3O14543 OR7E47P-204ENST00000575924 449 ntBASIC12.59□□□□□ -0.39
SOCS3O14543 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SOCS3O14543 RN7SL510P-201ENST00000581311 263 ntBASIC12.59□□□□□ -0.39
SOCS3O14543 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.59□□□□□ -0.39
SOCS3O14543 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.59□□□□□ -0.39
SOCS3O14543 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.59□□□□□ -0.39
SOCS3O14543 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SOCS3O14543 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.59□□□□□ -0.39
SOCS3O14543 AC005593.1-201ENST00000624894 515 ntBASIC12.59□□□□□ -0.39
SOCS3O14543 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC12.59□□□□□ -0.39
SOCS3O14543 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SOCS3O14543 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SOCS3O14543 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
SOCS3O14543 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SOCS3O14543 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SOCS3O14543 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SOCS3O14543 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SOCS3O14543 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
SOCS3O14543 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC12.59□□□□□ -0.39
SOCS3O14543 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SOCS3O14543 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SOCS3O14543 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SOCS3O14543 AC018695.7-201ENST00000624587 2492 ntBASIC12.59□□□□□ -0.39
SOCS3O14543 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC12.58□□□□□ -0.39
SOCS3O14543 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
SOCS3O14543 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
SOCS3O14543 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
SOCS3O14543 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC12.58□□□□□ -0.39
SOCS3O14543 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SOCS3O14543 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SOCS3O14543 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC12.58□□□□□ -0.4
SOCS3O14543 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC12.58□□□□□ -0.4
SOCS3O14543 AC092364.2-201ENST00000596710 2692 ntBASIC12.58□□□□□ -0.4
SOCS3O14543 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SOCS3O14543 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SOCS3O14543 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SOCS3O14543 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
SOCS3O14543 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SOCS3O14543 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
SOCS3O14543 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SOCS3O14543 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.58□□□□□ -0.4
SOCS3O14543 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SOCS3O14543 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SOCS3O14543 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SOCS3O14543 AC004870.1-201ENST00000315132 882 ntBASIC12.58□□□□□ -0.4
SOCS3O14543 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SOCS3O14543 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms