Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 MGST3-203ENST00000367885 680 ntTSL 2 BASIC28.04■■■□□ 2.08
CUX2O14529 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC28.04■■■□□ 2.08
CUX2O14529 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC28.04■■■□□ 2.08
CUX2O14529 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC28.04■■■□□ 2.08
CUX2O14529 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CUX2O14529 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC28.04■■■□□ 2.08
CUX2O14529 NAA38-207ENST00000576861 556 ntTSL 3 BASIC28.04■■■□□ 2.08
CUX2O14529 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC28.04■■■□□ 2.08
CUX2O14529 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CUX2O14529 RPL35-206ENST00000629845 340 ntTSL 5 BASIC28.04■■■□□ 2.08
CUX2O14529 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CUX2O14529 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CUX2O14529 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC28.04■■■□□ 2.08
CUX2O14529 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC28.04■■■□□ 2.08
CUX2O14529 KRT8P37-201ENST00000451609 1420 ntBASIC28.04■■■□□ 2.08
CUX2O14529 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CUX2O14529 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC28.03■■■□□ 2.08
CUX2O14529 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
CUX2O14529 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
CUX2O14529 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
CUX2O14529 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC28.03■■■□□ 2.08
CUX2O14529 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC28.03■■■□□ 2.08
CUX2O14529 HLA-DQB2-229ENST00000411527 1059 ntBASIC28.03■■■□□ 2.08
CUX2O14529 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC28.03■■■□□ 2.08
CUX2O14529 AC104784.1-201ENST00000473096 294 ntBASIC28.03■■■□□ 2.08
CUX2O14529 HNRNPA1P13-201ENST00000510646 963 ntBASIC28.03■■■□□ 2.08
CUX2O14529 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC28.03■■■□□ 2.08
CUX2O14529 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CUX2O14529 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC28.03■■■□□ 2.08
CUX2O14529 CYP2A7P1-201ENST00000595391 815 ntBASIC28.03■■■□□ 2.08
CUX2O14529 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC28.03■■■□□ 2.08
CUX2O14529 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
CUX2O14529 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC28.03■■■□□ 2.08
CUX2O14529 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CUX2O14529 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CUX2O14529 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC28.03■■■□□ 2.08
CUX2O14529 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CUX2O14529 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CUX2O14529 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC28.03■■■□□ 2.08
CUX2O14529 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC28.03■■■□□ 2.08
CUX2O14529 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CUX2O14529 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
CUX2O14529 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC28.02■■■□□ 2.08
CUX2O14529 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC28.02■■■□□ 2.08
CUX2O14529 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC28.02■■■□□ 2.08
CUX2O14529 CDK2AP2P3-201ENST00000422476 372 ntBASIC28.02■■■□□ 2.08
CUX2O14529 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC28.02■■■□□ 2.08
CUX2O14529 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC28.02■■■□□ 2.08
CUX2O14529 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CUX2O14529 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CUX2O14529 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC28.02■■■□□ 2.08
CUX2O14529 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CUX2O14529 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CUX2O14529 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CUX2O14529 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC28.02■■■□□ 2.08
CUX2O14529 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CUX2O14529 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CUX2O14529 SNX21-203ENST00000372541 771 ntTSL 2 BASIC28.02■■■□□ 2.08
CUX2O14529 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CUX2O14529 FNTAP2-201ENST00000430308 634 ntBASIC28.02■■■□□ 2.08
CUX2O14529 MPDU1-223ENST00000582151 728 ntBASIC28.02■■■□□ 2.08
CUX2O14529 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC28.02■■■□□ 2.08
CUX2O14529 AC133539.2-201ENST00000604757 467 ntBASIC28.02■■■□□ 2.08
CUX2O14529 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC28.02■■■□□ 2.08
CUX2O14529 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC28.02■■■□□ 2.08
CUX2O14529 SLC9A3P2-201ENST00000447821 2021 ntBASIC28.01■■■□□ 2.07
CUX2O14529 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC28.01■■■□□ 2.07
CUX2O14529 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CUX2O14529 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC28.01■■■□□ 2.07
CUX2O14529 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CUX2O14529 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CUX2O14529 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.07
CUX2O14529 AC244669.2-201ENST00000612320 853 ntBASIC28.01■■■□□ 2.07
CUX2O14529 MIR6069-201ENST00000620069 79 ntBASIC28.01■■■□□ 2.07
CUX2O14529 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC28.01■■■□□ 2.07
CUX2O14529 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC28.01■■■□□ 2.07
CUX2O14529 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC28.01■■■□□ 2.07
CUX2O14529 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CUX2O14529 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CUX2O14529 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CUX2O14529 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CUX2O14529 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC28■■■□□ 2.07
CUX2O14529 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC28■■■□□ 2.07
CUX2O14529 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CUX2O14529 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC28■■■□□ 2.07
CUX2O14529 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CUX2O14529 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
CUX2O14529 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC28■■■□□ 2.07
CUX2O14529 QPRT-203ENST00000562473 579 ntTSL 3 BASIC28■■■□□ 2.07
CUX2O14529 RN7SL555P-201ENST00000584742 339 ntBASIC28■■■□□ 2.07
CUX2O14529 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC28■■■□□ 2.07
CUX2O14529 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
CUX2O14529 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CUX2O14529 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC28■■■□□ 2.07
CUX2O14529 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC28■■■□□ 2.07
CUX2O14529 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
CUX2O14529 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC28■■■□□ 2.07
CUX2O14529 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC27.99■■■□□ 2.07
CUX2O14529 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CUX2O14529 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms