Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC21.3■■□□□ 1
CHL1O00533 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CHL1O00533 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHL1O00533 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC21.3■■□□□ 1
CHL1O00533 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHL1O00533 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC21.3■■□□□ 1
CHL1O00533 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
CHL1O00533 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHL1O00533 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CHL1O00533 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
CHL1O00533 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CHL1O00533 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC21.29■■□□□ 1
CHL1O00533 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC21.29■■□□□ 1
CHL1O00533 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC21.29■■□□□ 1
CHL1O00533 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC21.29■■□□□ 1
CHL1O00533 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CHL1O00533 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHL1O00533 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC21.29■■□□□ 1
CHL1O00533 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHL1O00533 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CHL1O00533 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC21.29■■□□□ 1
CHL1O00533 HLA-DRB6-201ENST00000411500 1235 ntBASIC21.29■■□□□ 1
CHL1O00533 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC21.29■■□□□ 1
CHL1O00533 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC21.29■■□□□ 1
CHL1O00533 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC21.29■■□□□ 1
CHL1O00533 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHL1O00533 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CHL1O00533 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHL1O00533 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CHL1O00533 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CHL1O00533 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC21.29■■□□□ 1
CHL1O00533 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHL1O00533 TUBB3P1-201ENST00000405796 1332 ntBASIC21.29■■□□□ 1
CHL1O00533 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CHL1O00533 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHL1O00533 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHL1O00533 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CHL1O00533 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC21.28■■□□□ 1
CHL1O00533 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CHL1O00533 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CHL1O00533 HLA-H-201ENST00000383620 1096 ntBASIC21.28■■□□□ 1
CHL1O00533 WRB-204ENST00000398753 699 ntTSL 3 BASIC21.28■■□□□ 1
CHL1O00533 HMGN1P19-201ENST00000436976 333 ntBASIC21.28■■□□□ 1
CHL1O00533 CNN2P2-201ENST00000443536 909 ntBASIC21.28■■□□□ 1
CHL1O00533 CNN2P3-201ENST00000450201 906 ntBASIC21.28■■□□□ 1
CHL1O00533 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC21.28■■□□□ 1
CHL1O00533 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHL1O00533 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC21.28■■□□□ 1
CHL1O00533 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHL1O00533 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC21.28■■□□□ 1
CHL1O00533 AC018529.1-201ENST00000613063 361 ntBASIC21.28■■□□□ 1
CHL1O00533 AC093512.1-201ENST00000617969 520 ntBASIC21.28■■□□□ 1
CHL1O00533 AL136317.3-201ENST00000618497 906 ntBASIC21.28■■□□□ 1
CHL1O00533 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHL1O00533 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CHL1O00533 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHL1O00533 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CHL1O00533 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHL1O00533 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHL1O00533 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CHL1O00533 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHL1O00533 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHL1O00533 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHL1O00533 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC21.28■■□□□ 1
CHL1O00533 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHL1O00533 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHL1O00533 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHL1O00533 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHL1O00533 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
CHL1O00533 AC005622.1-201ENST00000636801 1703 ntBASIC21.27■■□□□ 1
CHL1O00533 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CHL1O00533 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHL1O00533 NKILA-202ENST00000614771 2598 ntBASIC21.27■■□□□ 1
CHL1O00533 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHL1O00533 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHL1O00533 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHL1O00533 SPDYE7P-202ENST00000420373 878 ntBASIC21.27■■□□□ 1
CHL1O00533 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHL1O00533 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC21.27■■□□□ 1
CHL1O00533 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHL1O00533 DUX4L27-201ENST00000554796 1261 ntBASIC21.27■■□□□ 1
CHL1O00533 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC21.27■■□□□ 1
CHL1O00533 MIR4453-201ENST00000584019 89 ntBASIC21.27■■□□□ 1
CHL1O00533 AL390955.2-201ENST00000603032 514 ntBASIC21.27■■□□□ 1
CHL1O00533 COQ4-205ENST00000609948 956 ntTSL 2 BASIC21.27■■□□□ 1
CHL1O00533 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHL1O00533 AC020916.1-201ENST00000587762 1774 ntBASIC21.27■■□□□ 1
CHL1O00533 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CHL1O00533 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHL1O00533 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CHL1O00533 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CHL1O00533 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHL1O00533 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC21.27■■□□□ 1
CHL1O00533 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC21.27■■□□□ 1
CHL1O00533 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHL1O00533 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHL1O00533 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CHL1O00533 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CHL1O00533 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
CHL1O00533 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms