Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 AC005412.3-201ENST00000580309 715 ntBASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 AC026120.1-201ENST00000611536 926 ntBASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 AC012569.1-201ENST00000591191 1524 ntBASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NPIPA2E9PIF3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 AC092068.3-201ENST00000587894 2016 ntBASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 AL139400.1-201ENST00000366220 510 ntBASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 AL355306.1-201ENST00000415580 579 ntBASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 SPDYE11-202ENST00000450699 704 ntBASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 FAM86C2P-203ENST00000528684 1004 ntBASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 SPDYE9P-201ENST00000570642 692 ntBASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 SPDYE10P-202ENST00000612005 668 ntBASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 SPDYE8P-202ENST00000612377 668 ntBASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.21■□□□□ 0.03
NPIPA2E9PIF3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NPIPA2E9PIF3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
NPIPA2E9PIF3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NPIPA2E9PIF3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NPIPA2E9PIF3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NPIPA2E9PIF3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 TUBB8P12-201ENST00000308911 1335 ntBASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 TUBB7P-202ENST00000428444 1305 ntBASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 TUBB8P7-204ENST00000567960 1332 ntBASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 HMGA1P7-201ENST00000406908 502 ntBASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 AC023141.5-201ENST00000458585 616 ntBASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 AC099522.2-201ENST00000607001 744 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms