Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.36■□□□□ 0.37
SRRM3A6NNA2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRRM3A6NNA2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.36■□□□□ 0.37
SRRM3A6NNA2 AC010240.3-201ENST00000607688 395 ntBASIC17.36■□□□□ 0.37
SRRM3A6NNA2 MIR1199-201ENST00000621445 119 ntBASIC17.36■□□□□ 0.37
SRRM3A6NNA2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.36■□□□□ 0.37
SRRM3A6NNA2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.36■□□□□ 0.37
SRRM3A6NNA2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRRM3A6NNA2 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRRM3A6NNA2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.36■□□□□ 0.37
SRRM3A6NNA2 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRRM3A6NNA2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SRRM3A6NNA2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SRRM3A6NNA2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SRRM3A6NNA2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SRRM3A6NNA2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRRM3A6NNA2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SRRM3A6NNA2 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 AC106028.4-201ENST00000614509 607 ntBASIC17.35■□□□□ 0.37
SRRM3A6NNA2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM3A6NNA2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRRM3A6NNA2 PKD1P1-201ENST00000458669 6805 ntBASIC17.33■□□□□ 0.37
SRRM3A6NNA2 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SRRM3A6NNA2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SRRM3A6NNA2 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.33■□□□□ 0.37
SRRM3A6NNA2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.33■□□□□ 0.37
SRRM3A6NNA2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SRRM3A6NNA2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SRRM3A6NNA2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
SRRM3A6NNA2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SRRM3A6NNA2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.33■□□□□ 0.37
SRRM3A6NNA2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRRM3A6NNA2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRRM3A6NNA2 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRRM3A6NNA2 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRRM3A6NNA2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRRM3A6NNA2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SRRM3A6NNA2 RPS2P1-201ENST00000434010 821 ntBASIC17.33■□□□□ 0.36
SRRM3A6NNA2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.33■□□□□ 0.36
SRRM3A6NNA2 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms