Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
PLEKHD1A6NEE1 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
PLEKHD1A6NEE1 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PLEKHD1A6NEE1 HIST1H2BPS3-201ENST00000419683 341 ntBASIC25.35■■□□□ 1.65
PLEKHD1A6NEE1 AC234783.1-201ENST00000441761 496 ntBASIC25.35■■□□□ 1.65
PLEKHD1A6NEE1 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC25.35■■□□□ 1.65
PLEKHD1A6NEE1 AL139010.1-201ENST00000454878 894 ntBASIC25.35■■□□□ 1.65
PLEKHD1A6NEE1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PLEKHD1A6NEE1 SNX29P1-201ENST00000548357 1007 ntBASIC25.35■■□□□ 1.65
PLEKHD1A6NEE1 AL606495.2-201ENST00000605867 535 ntBASIC25.35■■□□□ 1.65
PLEKHD1A6NEE1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PLEKHD1A6NEE1 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC25.35■■□□□ 1.65
PLEKHD1A6NEE1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
PLEKHD1A6NEE1 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
PLEKHD1A6NEE1 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
PLEKHD1A6NEE1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 CROCCP2-202ENST00000412962 2773 ntBASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 AC092068.3-201ENST00000587894 2016 ntBASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 KRT223P-202ENST00000449164 1292 ntBASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 RHOA-206ENST00000454011 889 ntTSL 2 BASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PLEKHD1A6NEE1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC25.33■■□□□ 1.65
PLEKHD1A6NEE1 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
PLEKHD1A6NEE1 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PLEKHD1A6NEE1 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
PLEKHD1A6NEE1 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
PLEKHD1A6NEE1 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PLEKHD1A6NEE1 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PLEKHD1A6NEE1 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
PLEKHD1A6NEE1 NSL1-201ENST00000366976 722 ntTSL 2 BASIC25.33■■□□□ 1.65
PLEKHD1A6NEE1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PLEKHD1A6NEE1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
PLEKHD1A6NEE1 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PLEKHD1A6NEE1 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC25.33■■□□□ 1.65
PLEKHD1A6NEE1 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC25.33■■□□□ 1.65
PLEKHD1A6NEE1 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PLEKHD1A6NEE1 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
PLEKHD1A6NEE1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PLEKHD1A6NEE1 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
PLEKHD1A6NEE1 AC008735.3-201ENST00000596646 500 ntBASIC25.33■■□□□ 1.65
PLEKHD1A6NEE1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC25.33■■□□□ 1.65
PLEKHD1A6NEE1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PLEKHD1A6NEE1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PLEKHD1A6NEE1 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PLEKHD1A6NEE1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC25.33■■□□□ 1.64
PLEKHD1A6NEE1 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.64
PLEKHD1A6NEE1 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 AC133552.6-201ENST00000613406 534 ntBASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 AL033527.5-201ENST00000641382 801 ntBASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PLEKHD1A6NEE1 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms