Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TBC1D3BA6NDS4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TBC1D3BA6NDS4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TBC1D3BA6NDS4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TBC1D3BA6NDS4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TBC1D3BA6NDS4 PP12613-201ENST00000424958 2230 ntBASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 AC092580.3-201ENST00000430932 139 ntBASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 AC241585.1-201ENST00000433527 519 ntBASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 AC013467.2-201ENST00000605472 835 ntBASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TBC1D3BA6NDS4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 AC073592.8-201ENST00000624126 511 ntBASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.88■□□□□ 0.29
TBC1D3BA6NDS4 KRT8P39-201ENST00000396270 1433 ntBASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 HLA-H-201ENST00000383620 1096 ntBASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 LINC02560-201ENST00000596379 459 ntBASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 SPTSSB-204ENST00000617024 1292 ntBASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 PCDHB17P-201ENST00000539533 2393 ntBASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TBC1D3BA6NDS4 AC073439.1-201ENST00000624121 1774 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms