Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 YBX1P5-201ENST00000509441 847 ntBASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 MPDU1-223ENST00000582151 728 ntBASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 AC074386.1-202ENST00000463561 864 ntBASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 MIR4492-201ENST00000581627 80 ntBASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 AC006449.5-201ENST00000610658 2098 ntBASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPDC1A2A3K4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 AP006288.1-201ENST00000446065 395 ntBASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 CEND1P1-201ENST00000451006 455 ntBASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 AL139011.1-202ENST00000642063 584 ntBASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 SLC22A20-204ENST00000530038 1673 ntBASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPDC1A2A3K4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 AC092364.2-201ENST00000596710 2692 ntBASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 AC018695.7-201ENST00000624587 2492 ntBASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 MKNK2P1-201ENST00000437526 628 ntBASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 FAM185BP-201ENST00000443595 716 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms