Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRGV5A0A0B4J1U4 AC060834.1-201ENST00000443027 2032 ntBASIC14.93□□□□□ -0.02
TRGV5A0A0B4J1U4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRGV5A0A0B4J1U4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
TRGV5A0A0B4J1U4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
TRGV5A0A0B4J1U4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRGV5A0A0B4J1U4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRGV5A0A0B4J1U4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRGV5A0A0B4J1U4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRGV5A0A0B4J1U4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRGV5A0A0B4J1U4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRGV5A0A0B4J1U4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRGV5A0A0B4J1U4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRGV5A0A0B4J1U4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 AC106820.2-201ENST00000563775 3264 ntBASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 MIR943-201ENST00000401286 94 ntBASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 AC142381.1-201ENST00000426099 345 ntBASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 AC005498.2-205ENST00000593218 784 ntBASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 SNX33P1-201ENST00000592116 1762 ntBASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.92□□□□□ -0.02
TRGV5A0A0B4J1U4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 PCDHB18P-201ENST00000524813 2368 ntBASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 FAM8A3P-201ENST00000427218 844 ntBASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 SPCS2P1-201ENST00000561636 679 ntBASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 AC140878.1-201ENST00000565277 250 ntBASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV5A0A0B4J1U4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms